Serratia marcescens subsp. marcescens Db11: SMDB11_3896
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Entry
SMDB11_3896 CDS
T03985
Symbol
gntR
Name
(GenBank) gluconate utilization operon repressor
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smac03000
]
SMDB11_3896 (gntR)
Transcription factors [BR:
smac03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SMDB11_3896 (gntR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_3
HTH_10
DUF1233
HTH_23
Motif
Other DBs
NCBI-ProteinID:
CDG14456
UniProt:
A0ABC9INZ1
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All DBs
Position
complement(4145389..4146384)
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AA seq
331 aa
AA seq
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MKKKRPVLQDVADKVGVTKMTVSRYLRNPDQVSVALQQKIAVALDELGYIPNRAPDILSN
ATSRAIGVLLPSLTNQVFAEVLRGIESVTDAHNYQTMLAHYGYLPEREEERLTSLLSYNI
DGLILSERHHTPRTLKMIEVAGIPVVELMDCVSPCIDLAVGFNNFEAARQMTQQIIAHGH
RHVVYFGARQDERTIIKQQGYEQAMRESGLEPYSIMTARSSSYSAGGELLRVAQRDYPQI
DSIFCTNDDLAIGAAFECQRQGLSIPQDMAIAGFHGHDIGQVMVPKLASVLTPRERMGQI
GAERLLARLRGETVCPRMVDVGFTVIPGGSI
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaacggccggtactccaggatgtggcggacaaggtgggcgtgaccaagatg
acggtgagccgttatctgcgcaatcccgaccaggtttccgtcgccctgcagcaaaaaatc
gccgtcgcgctggatgagctgggctacatccccaaccgcgcgccggacatcctctccaac
gccaccagccgggcgattggcgtgctgttgccgtcgttgaccaaccaggtgttcgccgaa
gtgctgcgcggcatcgaaagcgtgaccgacgcgcacaactaccagaccatgctggcgcac
tatggctacctgccggagcgtgaagaagaacgtctgacctcgctgctgtcttacaatatc
gacggcctgatcctgtctgagcgccatcacacgccgcgcaccctgaaaatgatcgaggtg
gcgggcattccggtggtggagctgatggactgcgtctcgccgtgtatcgatctggcggtg
ggcttcaacaacttcgaggcggcgcgccagatgacccagcagatcatcgcgcacggccac
cgtcacgtggtctatttcggcgcccgtcaggatgaacgtaccatcatcaagcagcagggg
tatgagcaggcgatgcgtgaatccggcctggagccgtacagcatcatgaccgcgcgatct
tcctcctattccgccggcggtgaactgctgcgcgtggcgcagcgcgactatccgcagatc
gacagtatcttctgcaccaacgatgacctggcgatcggcgcggccttcgagtgccagcgg
caggggctgtcgatcccgcaggacatggcgatcgccggcttccacggccatgacatcggc
caggtgatggtgccgaagctggccagcgtgctgacgccgcgtgaacgcatggggcagatc
ggcgccgagcgcttgctggcccggctgcgcggtgaaaccgtgtgcccacgcatggtggac
gtcggtttcaccgtgatccccggcggcagcatctga
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