Serratia marcescens subsp. marcescens Db11: SMDB11_3967
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Entry
SMDB11_3967 CDS
T03985
Name
(GenBank) modulator of Rnase II stability
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SMDB11_3967
Enzymes [BR:
smac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
SMDB11_3967
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
GGDEF_2
PAS_10
Cas10-Cmr2_palm2
PAS_3
Motif
Other DBs
NCBI-ProteinID:
CDG14525
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Position
4227159..4229153
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AA seq
664 aa
AA seq
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MPADQGPELLNAHFGTQSPHWRLAFDSNALELSAVKGKAHVAVALSAMDAAKIRRLTGVT
ASLELTITLAGEPLHLHLVGRRVNNLEWAGTASAFSDTPSVARDLVHGLSFAEQVVSEAN
SVIVIVDQHGRIQRFNRLSEEYTGLHEHEVIGKNVFQLFMSPEEAAASRRNIAGFFRNGS
SYEVERWVKTVKGERLFLFRNKFVHSGSGKNEVFLICSGTDITEERRAQERLRVLANTDL
ITGLPNRNAIQDKINHAIATRSEESFGLVYLDLDNFKKVNDAYGHMFGDRLLVEVALAIL
GCLSPDQVLARLGGDEFLVLAPQTDRERLQTLAQRIIDRLKTPFRIGLIEVYTGCSIGIA
LCPEHGNDLDSLIRSADTAMYVAKEHGKRTYTVFSPEMNKRVAEYMWLDTNLRKGLEQNQ
LVLYYQPKIDARSGEVHSVEALVRWDSPERGLIPPLQFISYAEESGLIGPLGQWVLQTAA
SQAAQWQEQGLNLRVAVNLSARQLADDGIVNDLLGVLRHHRMAPCLLDFELTESSLIEDE
NRARALITRLRELGAQVHLDDFGTGYSSLAQLARIPLDAIKLDKSFVRGVNFNPVSQSLV
RAIVAAAEALAFRVIAEGVETESENHFLDEVGVDEKQGFLFARPMLPEQLEHWLQSYRPR
SPSA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagaccaaggccctgagcttcttaacgcccacttcggcacccaaagcccccac
tggcggctggcgtttgacagcaatgccctggagctgtccgccgttaagggcaaagcccac
gtcgcggtggcactcagcgccatggacgcggcgaaaattcgccgtctaaccggcgtaacc
gccagccttgagctgaccattacgctggccggcgaaccgctgcatctgcatctggtcggg
cgccgcgtcaacaacctcgaatgggcgggcaccgcttccgccttcagcgacaccccatcc
gtggcgcgcgatctggtgcacggcctctcctttgccgagcaggtggtgtccgaagccaac
tcggtgatcgtgatcgtcgatcagcacggccgcattcagcgtttcaaccggctgagcgag
gagtacaccgggctgcacgaacacgaagtgatcggcaaaaacgttttccagctgtttatg
agcccggaagaagccgccgcctcgcggcgcaacatcgccggcttcttccgcaacggatcg
tcttatgaggtggagcgttgggtaaagacggtcaagggcgaacggctgtttctgttccgc
aataagttcgtgcacagcggcagcggcaagaacgaggtgtttttgatctgctccggcacc
gacatcaccgaagaacgccgtgcgcaggaacggctgcgggtgctggccaacaccgatctt
atcaccggcctgcctaaccgtaacgccatccaggataagatcaaccacgccatcgctacg
cgcagcgaagagagcttcggcctggtgtacctcgatctcgacaacttcaaaaaggtcaac
gacgcctacggccatatgttcggcgatcggctgctggtcgaagtcgcgctggcgatcctc
ggctgcctgagcccggatcaggtgctcgcccgcctcggcggcgacgaatttctggtgctg
gcgccgcaaaccgatcgcgagcgcctgcaaacgctggcgcagcgcattatcgacaggctg
aaaacccctttccgcatcggcctgattgaggtgtataccggctgttcgatcggcatcgcg
ctgtgcccggagcacggcaacgatctcgacagcctgatccgcagcgccgataccgccatg
tacgtcgccaaggagcacggcaaacgcacctataccgtcttctcgccggagatgaacaaa
cgcgtcgccgaatacatgtggctggacaccaatctgcgtaaagggctggagcaaaatcag
ctggtgttgtattaccagcctaaaatcgacgcgcgcagcggcgaagtgcacagcgtggaa
gcgctggtgcgctgggattcgccggagcgcggcctgatcccgccgctgcagttcatctcc
tacgccgaggagtccggcctgatcggcccgctgggccaatgggtgctgcagaccgccgcc
agccaggcagcgcagtggcaagaacagggattgaacctgcgggtagcggtcaacctctcc
gcccggcagttggccgacgacggcatcgtcaacgacctgctcggggtgctgcgccaccat
cgcatggccccctgtctgctggacttcgagctgacagaaagcagcctgattgaagacgag
aaccgcgcgcgcgcgctgatcacccggctacgcgaactgggcgcgcaggtgcatctcgac
gacttcggcaccggctattcgtcactggcgcagctggcgcgtatacctctggacgccatc
aagctggataaaagcttcgtgcgcggggtgaatttcaatccggtatcacaatccctggta
cgcgcgatcgtcgcggcggcggaggcgctggccttccgggtgatcgccgaaggggtggag
accgagagcgaaaaccacttcctcgacgaggtcggcgtggacgaaaaacagggctttctg
tttgcgcggccaatgctcccggaacagctggagcattggctgcagtcctatcgcccgcgc
tcaccttccgcgtga
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