KEGG T03985: SMDB11

Serratia marcescens subsp. marcescens Db11: SMDB11_3993

Entry

SMDB11_3993       CDS       T03985

Symbol

trmA

Name

(GenBank) tRNA (uracil-5-)-methyltransferase

K00557

tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]

Organism

smac Serratia marcescens subsp. marcescens Db11

Brite

KEGG Orthology (KO) [BR:smac00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smac03016]
    SMDB11_3993 (trmA)
Enzymes [BR:smac01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     SMDB11_3993 (trmA)
Transfer RNA biogenesis [BR:smac03016]
Prokaryotic type
  tRNA modification factors
   Methyltransferases
    SMDB11_3993 (trmA)

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_25 Methyltransf_4 Cons_hypoth95 MTS Methyltransf_11 Methyltransf_15 Methyltransf_31 Methyltransf_12 TRM5-TYW2_MTfase PrmA

Other DBs

NCBI-ProteinID:

CDG14551

LinkDB

Position

4264265..4265368

AA seq 367 aa
MTPENLPIERYDDQLAEKVARLKTLMSPFAAPEPEVFRSPVDHYRMRAEFRIWHDADDMY
HIMFDQQTKQRIRVDQFPAASELINRLMTALIAALKPEPILRHKLFQIDYLSTRSGKIIA
SLLYHRKLDDVWQQRAEQLRDELRAQGFDLQLIGRASKTKIMLDQDYVDEVLPVAGRDMI
YRQVENSFTQPNAAMNVQMLEWALAVTAGSKGDLLELYCGNGNFSLALARNFERVLATEI
AKPSVAAAQYNIAANHIDNVQIIRMAAEDFTQAMNGVREFNRLKGIDLSGYNCETIFVDP
PRSGLDEETVKMVQAYPRILYISCNPETLCANLETLQATHRVSRLALFDQFPYTHHMECG
VLLEKHR

NT seq 1104 nt +upstreamnt +downstreamnt
atgacgcccgagaatttgcctattgaacgttacgatgaccaactggcggagaaagtcgcc
cgcctgaagacgttgatgtcaccgttcgcggcgcccgagccggaagtgttccgctcgcca
gtcgaccactaccgcatgcgcgccgaattccgcatctggcacgacgcggacgacatgtat
cacatcatgttcgatcagcagaccaagcagcgtattcgcgtcgaccagttcccggcggcc
agcgagctgatcaaccgcctgatgaccgccctgatcgccgcgctgaaaccggagccgatc
ctgcgccacaagctgttccagatcgattatctgtcgacgcgaagcggcaaaatcatcgct
tcgctgctgtatcaccgcaagctggatgacgtttggcaacagcgagccgagcagctgcgc
gacgagctgcgcgctcagggtttcgacctgcagctgatcggccgggcgtcgaagaccaag
atcatgctcgaccaggattatgttgacgaagtgctgccggtcgccggccgcgacatgatc
tatcgtcaggtggaaaacagcttcactcagcccaatgcggccatgaacgtgcagatgctg
gagtgggcgttggcggtcaccgccggttccaaaggcgatttgctggagctgtactgtggc
aatggcaacttctcgctggcgctggcgcgcaatttcgagcgcgtgctggcgaccgagatc
gccaagccgtcggtggcggcggcgcagtacaacatcgccgccaaccatatcgacaacgtg
caaatcatccgcatggcggcagaagacttcactcaggcgatgaacggagtacgcgaattc
aaccggttgaaaggcatcgatctgagcggctacaactgcgagacgattttcgtcgatccg
ccgcgcagcgggctggacgaggaaacggtgaagatggtgcaggcttacccgcgcattctg
tatatttcatgcaatccggaaacgctgtgtgccaacctggaaacgctgcaggccacccac
cgggtcagccgcctggcgctgttcgatcagttcccgtatacccatcacatggaatgcggt
gtgttgctggaaaagcatcgctga

DBGET integrated database retrieval system