Serratia marcescens subsp. marcescens Db11: SMDB11_3999
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Entry
SMDB11_3999 CDS
T03985
Name
(GenBank) putative pyridine nucleotide-disulphide oxidoreductase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00010
Glycolysis / Gluconeogenesis
smac00020
Citrate cycle (TCA cycle)
smac00260
Glycine, serine and threonine metabolism
smac00280
Valine, leucine and isoleucine degradation
smac00310
Lysine degradation
smac00380
Tryptophan metabolism
smac00620
Pyruvate metabolism
smac00630
Glyoxylate and dicarboxylate metabolism
smac00640
Propanoate metabolism
smac00670
One carbon pool by folate
smac00785
Lipoic acid metabolism
smac01100
Metabolic pathways
smac01110
Biosynthesis of secondary metabolites
smac01120
Microbial metabolism in diverse environments
smac01200
Carbon metabolism
smac01210
2-Oxocarboxylic acid metabolism
smac01240
Biosynthesis of cofactors
Module
smac_M00009
Citrate cycle (TCA cycle, Krebs cycle)
smac_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
smac_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
smac_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SMDB11_3999
00020 Citrate cycle (TCA cycle)
SMDB11_3999
00620 Pyruvate metabolism
SMDB11_3999
00630 Glyoxylate and dicarboxylate metabolism
SMDB11_3999
00640 Propanoate metabolism
SMDB11_3999
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SMDB11_3999
00280 Valine, leucine and isoleucine degradation
SMDB11_3999
00310 Lysine degradation
SMDB11_3999
00380 Tryptophan metabolism
SMDB11_3999
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SMDB11_3999
00670 One carbon pool by folate
SMDB11_3999
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smac04147
]
SMDB11_3999
Enzymes [BR:
smac01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SMDB11_3999
Exosome [BR:
smac04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SMDB11_3999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
GIDA
Pyr_redox_3
Pyr_redox
Lys_Orn_oxgnase
DAO
HI0933_like
FAD_binding_2
Lycopene_cycl
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
CDG14557
LinkDB
All DBs
Position
4269894..4271342
Genome browser
AA seq
482 aa
AA seq
DB search
MKLLNVDVAVIGGGTAGLGAYRAAKLSTPSVVMIEGGPYGTTCARVGCMPSKLLIAAAEA
VHQIERAPGFGVHPTGKTRIDGREVMARVKRERDRFVGFVLEGVDEIPAADKIQGYARFI
DDNTLQVDDHTCIVAQRIVIATGSRPSWPAPWNELGDRLIVNDDLFNWDDLPQSVAVFGP
GVIGLELGQALHRLGVDTKVFGIGGAVGPLTDSAVRDYAAKALGEEFYLDADVKVEMMQR
EGDRVFIRYQDLQGQSQEILVDYVLAATGRRPNVDRLGLENTDLQLDTRGVPLADRLTMQ
TSVPHIFIAGDASNQLPLLHEASDQARIAGANAGSFPEINPGLRRSAISVVFSDPQIAMV
GSTFRELSEKFSACGCFEVGKVSFENQGRSRVMLRNKGILHVYGEQGTGRFLGAEMIGPD
AEHIAHLLAWAHQQQMTVDQMLDMPFYHPVIEEGLRTALRDLQAKLKLGTAEIERCQRCP
GE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgttgaacgttgatgtcgcggtcatcggcggcggcaccgcagggctcggcgcc
tatcgcgcggccaaactgtctacccccagcgtggtgatgattgaaggcgggccttacggc
accacctgtgcgcgcgttggctgcatgccatccaaattactgatcgccgccgccgaagcg
gtgcatcaaatcgaacgtgcgccgggctttggcgtgcacccaaccggcaaaacgcgtatc
gacggacgcgaggtgatggcgcgcgtcaaacgcgaacgcgatcgtttcgtcggcttcgtg
ctggaaggcgtggacgaaatcccggccgccgacaaaattcagggctatgcccgctttatc
gacgacaacacgctgcaggtcgatgaccatacgtgcatcgtggcgcagcgcatcgtgatc
gccaccggctctcgccccagctggccggcgccgtggaacgaactgggcgatcgcctgatc
gtcaacgacgatctgttcaactgggatgacttgccgcagtccgtggcggtattcggcccc
ggcgtcatcgggctggagctggggcaagcgctgcaccgcctcggcgtcgacaccaaggtc
ttcggcatcggcggcgccgtcgggccgctgaccgacagcgccgtgcgcgattacgctgcg
aaggcgttgggagaagagttctacctcgacgccgacgtgaaagtggagatgatgcagcgc
gaaggcgaccgcgtatttatccgctatcaggatctgcagggccagtcgcaggagatcctg
gtggactacgtgctggccgccaccggccgccgccccaacgtcgatcggctgggtctcgaa
aacaccgacctgcagctcgacactcgaggcgtgccgctggccgaccgcctgacgatgcaa
accagcgtgccgcatatctttatcgccggcgacgccagcaaccagctgccgctgttgcac
gaggccagcgatcaggcgcgcatcgccggcgccaacgccggcagcttcccggagatcaat
ccaggtctgcgccgcagcgcgatttcggtggtgttctccgatccgcagatcgccatggtc
ggctcgactttccgcgagctgagcgagaagttcagcgcctgcggctgctttgaagtgggc
aaagtctcgtttgagaatcagggccgctcgcgggtgatgctgcgcaataagggcattttg
cacgtctacggcgagcaaggcaccggccgtttcctcggcgcggaaatgatcggccccgac
gccgaacacattgcgcacctgttagcctgggcgcaccaacagcagatgaccgtcgatcag
atgctggacatgccgttctatcatccggtgatcgaagaaggcttgcgcaccgcgctgcgc
gatctgcaggcgaagctcaaactcggcacggccgaaatcgagcgctgccagcgctgtccg
ggtgagtaa
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