Serratia marcescens subsp. marcescens Db11: SMDB11_4013
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Entry
SMDB11_4013 CDS
T03985
Symbol
priA
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SMDB11_4013 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smac03400
]
SMDB11_4013 (priA)
Enzymes [BR:
smac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMDB11_4013 (priA)
DNA repair and recombination proteins [BR:
smac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SMDB11_4013 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA-like_WH
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_22
AAA_19
Zeta_toxin
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
CDG14571
UniProt:
A0ABC9IP89
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All DBs
Position
4286807..4289002
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AA seq
731 aa
AA seq
DB search
MPVVHVALPVPLARTFDYLLPPGMQPVAGARVGVPWGRQHAIGIVTGCSDTSELPLDKLK
PIDSVIDAESLFSPSLWRILRWASDYYHYPIGEVLFHALPILLRQGKPAEAAPLWQWFAT
EEGRATPPESLKRAPKQQQALAALLQRPIYRHQVSQLELTESALQALRAKGLIDLRAQVA
DTHDWRPNFAVLGERLQLNTEQATAVGAIRSEDEQFAAWLLAGVTGSGKTEVYLSVLENV
LAKGRQALVLVPEIGLTPQTIARFRERFNAPVDVLHSGLNDSERLAVWLRARSGEAAIVI
GTRSALFTPFRQLGVIIIDEEHDSSYKQQEGWRYHARDLAVFRAREEDIPMVMGSATPAL
ETLHNVQLGKYRQLKLTQRAGNAKPAAQHLIDLKGLPLKVGLSQPLLKSMQHHLKAGNQV
MLFLNRRGYAPALLCHECGWIAECQRCDHYYTFHQHQRQLRCHHCDSQRPVPHQCPQCGS
THLVSVGVGTEQLEHELAPLFPDTPITRIDRDTTSRKGSLEQHLADIHRGEARILIGTQM
LAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVLLQTHHP
EHPLLQVLLQQGYDAFAKQTLAERNSVFLPPYTSHIIVRAEDHDNQQAPLFLQQLRNLLE
ASPLKDDSLWVMGPVPALQSKRGGRFRWQLLLQHPTRRVLQQLMKSSLPLIGTLPQTRKV
KWTLDVDPIDS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgtacacgttgccttgccggtccccctcgcccgcaccttcgactatctgctg
ccgcccggcatgcagccggtggccggcgcgcgcgtgggcgtgccctggggcaggcagcat
gcgatcggcatcgtcaccggctgcagcgacaccagcgaactgccgctggacaagctcaaa
ccgatcgacagcgtgatagacgccgagtcgctgttctcccccagcctgtggcgcatcctg
cgctgggccagcgattactatcactaccccatcggcgaagtgctgtttcacgcgctgccg
atcctgctgcggcaaggcaaaccggccgaagccgcgccgctgtggcagtggttcgccacc
gaagaggggcgcgccaccccgcccgaaagcctgaaacgcgcgccgaaacagcagcaggcg
ctggcggcgctgctgcaacgcccgatctatcgccatcaggtcagccagctggagctgacg
gaaagcgccctgcaggcactgcgcgccaaagggctgatcgatctgcgcgctcaggtcgcg
gatacgcacgactggcgccctaacttcgcggtgctcggcgagcggctgcagctgaacacc
gaacaggctaccgccgtcggggcgatcagaagcgaggatgagcagttcgccgcctggctg
ctggccggggtgaccggctccggcaagaccgaggtgtacctcagcgtgctggaaaacgtg
ctggccaaaggccgacaggcgctggtgctggtgccggaaatcggcctgacgccgcaaacc
atcgcccgctttcgcgagcgcttcaacgcgccggtggacgtgctgcactccgggttaaac
gacagcgagcggctggcggtttggctgcgcgcgcgcagcggcgaagccgccatcgtcatc
ggcacccgctcggcgctgttcacgccattccgacagttgggcgtgatcatcatcgacgaa
gagcacgacagctcttataaacagcaggaaggctggcgctaccacgcccgcgatctggcg
gtgttccgcgcccgggaagaagacatcccgatggtgatgggctccgccacgccggcactg
gaaacgctgcacaacgtgcaactgggcaaatatcgccagttgaagctcacccagcgcgcg
ggcaacgccaaaccggcggcgcagcacctgatcgatctgaaagggctgccgctgaaggtc
ggcctgtcgcaaccgcttttgaaaagcatgcagcaccatttaaaagccggcaaccaggtg
atgctgttcctcaaccgccgcggttacgccccggcgctgctgtgccacgagtgcggttgg
atcgccgagtgccagcgttgcgatcactactacaccttccaccagcatcagcgccagctg
cgctgccaccactgcgacagccagcgaccggtgccgcaccagtgcccacagtgcggctcc
acccatctggtgtcggtcggcgtcggcaccgaacagctggagcatgagctggcgccgctg
ttccccgacacgccgatcacccgcatcgatcgtgacaccaccagccgcaaaggatcgctg
gagcagcacctggcggatattcatcgcggcgaagcgcgcattctgatcggcacacagatg
ctggccaagggccaccattttcccgacgtcacgctggtggcgttgctggacgtggacggc
gcgctgttctccgccgacttccgttccgccgagcgtttcgctcagctgtatactcaggtc
tccgggcgagcgggccgcgcgggcaaacagggtgaagtgctgctgcaaacccaccacccg
gagcacccgttattgcaggtgctgctgcaacagggttacgacgccttcgccaaacagacg
ctggcggagcgcaacagcgtgtttctgccgccttacaccagccacatcatcgtgcgcgcc
gaagatcacgacaaccagcaggccccgctgttcctgcagcagctgcgcaacctgctggaa
gccagcccgctgaaggacgactcgctgtgggtgatgggcccggtgccggcgctgcagtcg
aaacgcggcggccgtttccgatggcagctgttgctgcaacatccgacgcggcgcgtcctg
caacagctgatgaaaagctcgctgccgctgatcggcactctgccgcaaacgcgcaaggtg
aaatggacgctggatgtcgatccgatcgacagctga
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