Serratia marcescens subsp. marcescens Db11: SMDB11_4014
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Entry
SMDB11_4014 CDS
T03985
Symbol
cytR
Name
(GenBank) LacI-family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smac03000
]
SMDB11_4014 (cytR)
Transcription factors [BR:
smac03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SMDB11_4014 (cytR)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_Crp_2
MarR_2
ANF_receptor
HTH_3
Sigma54_DBD
HTH_24
TetR_N
MerR
Motif
Other DBs
NCBI-ProteinID:
CDG14572
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Position
4289294..4290322
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AA seq
342 aa
AA seq
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MEHKKELSMATMKDVAEMAGVSTATVSRALMNPEKVSTPTRQKVEQAVLAVGYSPHALSR
NIKRNESRTILVIVPDICDPFFADVIQGIEQTAAQQGYLVLIGDCAQQNQQERTFVNLII
TKQIDGMLLLGSNLPFDASKEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFEAVHYLH
QLGHRQIACVAGPEQMPLSHYRLQGYVQALRRNGITVESSYITRGDFTYEAGAQALTQLM
AQPKPPTAVFCHSDVMAIGVLSQAKKMGLRVPQDLSIVGFDDLKLAQYCDPPLTTVAQPR
FQIGQQAMLLLLEQLNGQTVASGSRLLDSELIIRGSTAAPKR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttggaacacaagaaagagttatccatggcgaccatgaaagacgtcgccgaaatggcgggc
gtttcaacggctaccgtatcgcgtgcgctgatgaacccggaaaaggtgtcgacgccaacg
cgccagaaagtagaacaggccgtgctggccgtgggttattctcctcatgctctgtcacgc
aatatcaaacgcaacgaatctcgcactatcctggtgatcgtgcccgacatctgcgatccg
tttttcgccgatgtgatccaggggatcgaacagaccgccgcccaacaaggctatctggtg
ctgatcggcgactgcgcgcagcaaaaccagcaagaacgcaccttcgtcaatctgatcatc
accaaacagatcgacggcatgctgctgctgggctctaacctgccgttcgacgccagcaag
gaagagcagcgcaacctgccgccgatggtgatggccaacgagttcgcgcccgagctggaa
ctgccgacggtgcatatcgacaacctgaccgccgcctttgaagccgtgcattatttgcat
caactgggccaccggcagatcgcctgcgtcgccgggccggaacagatgccgctgagccat
tatcggctacagggttacgttcaagcgctacgtcgtaatggcattaccgtcgaaagcagc
tatattacccggggtgattttacctacgaagccggcgcgcaagcgctgacccagctgatg
gctcagccgaaaccgccgacggcggtgttctgccacagcgacgtcatggcgatcggcgtg
ctgtcccaggcgaagaaaatggggctgcgggtaccgcaggatctgtcgatcgtcggcttt
gacgacctcaagctggcgcagtattgcgatccgccgctgaccacggtggcgcagccgcgt
ttccagataggccaacaggcgatgttattgctgttggagcagttgaacggccagacggtg
gccagcggctcccggctgttggacagtgaattgattatcagaggcagcaccgctgccccg
aaacgctag
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