Serratia marcescens subsp. marcescens Db11: SMDB11_4099
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Entry
SMDB11_4099 CDS
T03985
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac03030
DNA replication
smac03410
Base excision repair
smac03420
Nucleotide excision repair
smac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMDB11_4099 (polA)
03410 Base excision repair
SMDB11_4099 (polA)
03420 Nucleotide excision repair
SMDB11_4099 (polA)
03440 Homologous recombination
SMDB11_4099 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smac03032
]
SMDB11_4099 (polA)
03400 DNA repair and recombination proteins [BR:
smac03400
]
SMDB11_4099 (polA)
Enzymes [BR:
smac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMDB11_4099 (polA)
DNA replication proteins [BR:
smac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SMDB11_4099 (polA)
DNA repair and recombination proteins [BR:
smac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SMDB11_4099 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SMDB11_4099 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CDG14658
LinkDB
All DBs
Position
complement(4373501..4376299)
Genome browser
AA seq
932 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYQPSHVAV
VFDAKGKTFRDDLFAEYKSHRPPMPDDLRAQIEPLHSMVKAMGLPLLVTPGVEADDVIGT
LALEAEKAGHAVLISTGDKDMAQLVTPNVTLINTMNNTILGPQEVCDKYGIPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGIGGLDALYGNLENIATLSFRGAKTMAAKLEQNK
EVAYLSYKLATIKTDVELDLTCADLTVSAPDVDTLQQLFKQYEFKRWLADVEAGVWLENK
KGAGAKAAGAAKSAIAAETPKALAEAKLSQDGYVTILDETTFTDWLARLKKADVFAFDTE
TDGLDTLTANLIGLSFAIAPGEAAYLPVAHDYLDAPPQLDRTYVLEALKPLLEDEKALKV
GQNLKFDMSLLARYGIEMRGIAYDTMLESYVLDSVGGRHDMDSLADRYLGHKTITFEEIA
GKGKNQLTFNQIALEQAAPYAAEDADVTLQLHLAMWPQLKQSAELLTVFNEIEMPLLPVL
SHIERTGVLIDPAILSAHSQELAKRLAELEVQAHELAEEPFNLASTKQLQAILYEKQKLP
VLKKTPGGAPSTNEEVLAELALDYPLPKVILEYRGLAKLKTTYTDKLPLMINPVSGRVHT
SYHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPEGYRIVAADYSQIELRIMAHL
SQDEGLLKAFAEGKDIHRATASEVFGVPLDKVTGEQRRSAKAINFGLIYGMSAFGLARQL
GIPRGEAQRYMDLYFERYPGVLDYMERTRQQASEQGYVSTLDGRRLYLPDVRSSNGMRRK
AAERAAINAPMQGTAADIIKRAMIEVDAWLQGQEKPLVRAIMQVHDELVFEVHESVLEEA
SQRIRQLMEGSMTLAVPLKVDVGVGMNWDEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattgcagaaaatccactaatcctggttgacggttcctcctacctctaccgc
gcttatcacgccttcccgccgctgaccaactcggcgggcgagccaaccggcgcgatgtat
ggcgtgctgaatatgctgcgcagcctgctgctgcagtatcaaccgagccacgttgccgtg
gtgtttgatgctaaagggaagaccttccgcgacgatctgttcgctgaatacaagtcacac
cggccaccgatgccggacgatttgcgtgcgcagatcgagccgctgcacagcatggtcaag
gcgatgggcctgccgctgctggtgacgcccggcgttgaggcggacgacgtcatcggtacg
ctggcgctggaggccgaaaaggccggccacgcggtgctgatcagcaccggcgacaaagac
atggcgcagttggtgacgccgaacgtcaccctgatcaataccatgaacaacacgatcctc
ggcccgcaggaagtgtgcgataaatatggtattccgccggagctgatcatcgacttcctg
gcgttgatgggcgattcatcggacaacattcccggcgtgccgggcgtgggcgagaaaacc
gcccaggcgttgctgcaggggatcggtgggctggatgcgctgtacggcaatctggagaat
atcgccacgctgagcttccgcggcgccaaaaccatggcggccaagctggaacagaacaaa
gaggtcgcgtatctctcctataagctggcgacgatcaaaaccgacgtcgagttggatctg
acctgtgcggacctgacggtctccgcgccggatgtcgacacgttgcaacagctgttcaaa
cagtacgagttcaaacgctggctggcggacgtggaggccggcgtctggctggaaaacaag
aaaggcgcgggcgcgaaagctgccggcgccgccaaatcggccatcgctgcggaaacgccg
aaagcgctggcggaggccaagctgtctcaggacggttatgtcaccatcctggacgaaacg
acctttaccgactggctggcgcggctgaaaaaggccgacgtatttgccttcgataccgaa
accgatggcctggatacgctgaccgccaacctgatcggcctgtccttcgcgatcgcgccg
ggtgaagcggcttatttgccggtggcacacgattatctggatgcaccgccacagctggat
cgcacctacgtgctggaagcgctcaagccgctgctggaggacgagaaggcgctcaaggtc
gggcaaaacctgaagttcgacatgagcctgctggcgcgctacggcatcgagatgcgcggt
atcgcctatgacaccatgttggagtcctatgtgctggacagcgtcggtggccgtcatgat
atggacagcctggccgatcgttatctgggccacaaaaccatcaccttcgaagagatcgcc
ggcaagggtaaaaaccagctgacgttcaaccagatcgcgctggagcaggcggcgccttac
gccgccgaagacgcggatgtcacgctgcagctgcacctggcgatgtggccgcagctgaaa
cagagcgcggagctgctgacggtattcaatgagattgaaatgccgctgctgccggtgctg
tcgcatatcgaacgcaccggggtgctgatcgatccggccattttgtcggcccactcccag
gagctggccaagcgtttggcggaactggaggtgcaggcccatgagctggcggaagagccg
ttcaacctggcgtcgaccaagcagctgcaggctatcttgtacgaaaaacaaaagctgccg
gtgctgaagaaaaccccgggcggggcgccgtccaccaacgaagaggtgctggccgagctg
gcgctcgactacccgctgccgaaggtgatcctggaataccgcggcctggcgaagctgaag
accacctataccgataagctgccgctgatgatcaatccggtcagcggccgggtgcatacc
tcgtaccatcaggcggtgaccgctaccggccgtctctcctcgagcgatccgaacctgcag
aacatcccggtgcgcaacgatgaagggcgacgcattcgccaggcctttatcgcgccggaa
ggctaccgcatcgtcgcggccgactactcgcaaatcgagctgcgcatcatggcgcatttg
tcacaggatgaagggctgctgaaggccttcgccgaagggaaagacattcaccgcgccacg
gcgtcggaagttttcggcgtgccgttggataaagtgaccggcgagcagcgccgcagcgcc
aaggcgattaacttcggcctgatttacggcatgagcgccttcggcctggcgcgtcagctg
gggatcccgcgtggggaagctcagcgctatatggatctctacttcgagcgttacccaggc
gtgctggactacatggagcgtacccgccagcaggcctcagaacagggctatgtcagcacg
ttggatggtcgccgtctgtacctgccggacgtccgctccagcaatggcatgcgccgcaag
gcggccgagcgcgccgctatcaacgccccgatgcagggcacggcagctgatatcatcaag
cgtgcgatgattgaggtcgacgcctggctgcaagggcaggagaagccgttggtgcgcgca
atcatgcaggtgcacgatgaattggtgtttgaggtgcacgagtcggtgctcgaagaagcc
agccaacgtatccgccaattgatggaaggcagcatgaccctggcggtgccgctgaaggtt
gacgtgggcgtcggcatgaactgggatgaggcgcactga
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