Serratia marcescens subsp. marcescens Db11: SMDB11_4352
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Entry
SMDB11_4352 CDS
T03985
Symbol
hemB
Name
(GenBank) delta-aminolevulinic acid dehydratase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00860
Porphyrin metabolism
smac01100
Metabolic pathways
smac01110
Biosynthesis of secondary metabolites
smac01120
Microbial metabolism in diverse environments
smac01240
Biosynthesis of cofactors
Module
smac_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
smac_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SMDB11_4352 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smac04147
]
SMDB11_4352 (hemB)
Enzymes [BR:
smac01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
SMDB11_4352 (hemB)
Exosome [BR:
smac04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SMDB11_4352 (hemB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
CDG14912
UniProt:
A0ABC9IPY2
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All DBs
Position
4665914..4666936
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AA seq
340 aa
AA seq
DB search
MSYAFPGTFPGRRMRRVRRHDFSRRLVAENQLTVNDLIYPVFVMEGSNRQEEVASMPGVS
RMTIDLLIKEAETIAKLGVPVISLFPVIEPGLKSLHAEEAYNPEGLVQRTVRALKDAVPE
LGILTDVALDPYTTHGQDGVIDEQGYVINDVTKDILVRQALSHAEAGAEIVAPSDMMDGR
IGAIRDRLELQGLVNTQIMAYSAKYASCYYGPFRDALGSSGNLKGGNKKTYQMDPANSDE
ALQEIAQDLQEGADMVMVKPGMPYLDVVRRVKDTFGVPTFAYQVSGEYAMHMAAIQNGWL
QEQPAVMESLMCFKRAGADGVLTYFAKRVAQWLHDDAMRR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgcatttccgggtaccttccctggtcgtcgtatgcgccgcgtgcgccgtcat
gacttcagccgccgcctggtcgccgagaaccaactgacggtcaatgatctgatttatccg
gtgtttgtcatggaaggcagtaaccgccaggaagaagtggcctcgatgccgggcgtatcg
cgcatgacgatcgatctgctgattaaggaagcggaaaccatcgccaaactcggcgtgccg
gtgatctccctgttccctgtgatcgaaccgggtctgaaatcgctgcatgcggaagaagcc
tataacccagaagggctggtacagcgcacggtgcgcgcgctgaaagacgcggtgcctgag
ctgggcattctgaccgacgtcgcgctcgatccctacaccacccacgggcaggacggagtg
atcgatgagcagggctacgtgattaacgacgtgaccaaagacattctggtgcgtcaggcg
ctgtctcatgccgaagcaggcgcagaaatcgtggcgccgagcgacatgatggacggccgt
atcggggcgatccgcgatcgtctggaactgcagggtttggtgaatacccagattatggcc
tactccgccaagtatgcttcctgctactacggtccgttccgcgatgcgctgggttccagc
ggcaacctgaagggcggcaacaaaaaaacctatcagatggatccggccaacagcgacgaa
gcgctgcaggagattgcgcaggatctgcaggaaggtgcggacatggtgatggtgaaaccg
ggcatgccttacctggacgtggtgcgccgcgtgaaggataccttcggtgtgccgactttt
gcttatcaagtgtccggcgagtacgccatgcacatggcggcgattcagaacggctggctg
caggagcaacctgcggtgatggagtcgttgatgtgcttcaaacgcgccggcgccgacggc
gtgctgacctacttcgccaagcgtgtcgcccagtggctgcacgacgacgcgatgcgccgc
taa
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