Serratia marcescens subsp. marcescens Db11: SMDB11_4358
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Entry
SMDB11_4358 CDS
T03985
Symbol
fadB
Name
(GenBank) fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00071
Fatty acid degradation
smac00280
Valine, leucine and isoleucine degradation
smac00310
Lysine degradation
smac00362
Benzoate degradation
smac00380
Tryptophan metabolism
smac00410
beta-Alanine metabolism
smac00640
Propanoate metabolism
smac00650
Butanoate metabolism
smac00907
Pinene, camphor and geraniol degradation
smac00930
Caprolactam degradation
smac01100
Metabolic pathways
smac01110
Biosynthesis of secondary metabolites
smac01120
Microbial metabolism in diverse environments
smac01200
Carbon metabolism
smac01212
Fatty acid metabolism
Module
smac_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SMDB11_4358 (fadB)
00650 Butanoate metabolism
SMDB11_4358 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
SMDB11_4358 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SMDB11_4358 (fadB)
00310 Lysine degradation
SMDB11_4358 (fadB)
00380 Tryptophan metabolism
SMDB11_4358 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SMDB11_4358 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SMDB11_4358 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SMDB11_4358 (fadB)
00930 Caprolactam degradation
SMDB11_4358 (fadB)
Enzymes [BR:
smac01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SMDB11_4358 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SMDB11_4358 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SMDB11_4358 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
SMDB11_4358 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
CDG14918
LinkDB
All DBs
Position
complement(4672124..4674313)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGETLQLHWLDNGIAELVFNAPGSVNKLDTRTVASLGEALTVLENQPELKGLLLRST
KAAFIVGADITEFLSLFAAPAEKLHEWLVFANNVFNRLEDLPVPTISAINGYALGGGCEC
ILATDFRVASPDARIGLPETKLGIMPGFGGSVRLPRLLGNDSALEIIAAGKDVSAKDALK
VGLVDAVVAPEKLAEAALKMLQQAIDGKLDWRAARQPKLEPLKLSPIEAAMSFTTAKGMV
LQTAGKHYPAPMTAVKTIEAAAKLGRDEALKLETASFVPLARSNEARALVGIFLNDQFVK
GQAKKLAKNVDAPKQAAVLGAGIMGGGIAYQSALKGVPVIMKDISDKSLTLGMNEAAKLL
NKQLERGKLDGLKMAQVLSTIQPTLDYAGIERAQVIVEAVVENPKVKAAVLSEVENLIGE
ETVLASNTSTIPINHLAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEQTSDETIAKVVAY
ASRMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPERMSKDYRDAIDVMFDNQRFGQKNQLGFYRYSQDNKGKP
RKDNDEQTDALLAEVSQPRQTISDEEIVARMMIPMINEVVRCLEEKIVASPAEADMALVY
GIGFPPFHGGAFRYLDTLGTANYVELAQRYAHLGALYQVPAGLRAKAERNESYYPVATPL
SDVATRQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaacattacaactgcactggctcgataacggcatcgccgagctg
gtgttcaacgcaccgggctcggtcaacaagctggacacccgcaccgtcgccagcctgggc
gaagcgctcaccgtgctggaaaaccagccagagctcaaggggctgctgctgcgctccacc
aaagccgcatttatcgtcggcgccgatatcaccgaattcctttctctgttcgccgcgccg
gctgaaaagctgcacgagtggctggtattcgccaacaacgtctttaaccggctggaagat
ttgccggtaccgaccatttcggccattaacggctatgcactcggcggcggttgcgaatgc
attctggcgaccgatttccgcgtcgcctcaccggacgcgcgcatcggcctgccggaaacc
aaattgggcatcatgccgggcttcggcggttctgtccgcctgccacgcctgctgggtaac
gacagcgcgctggaaatcatcgccgccggcaaagacgtcagcgccaaagacgcgttgaaa
gtcggcctggtggatgcggtggtagcaccggaaaaactggccgaagcggcgctgaaaatg
ctgcaacaggcgatcgacggcaagctggactggcgcgccgcacgtcaacctaagctggag
ccgctgaagctcagcccgatcgaagcggcaatgagcttcaccaccgccaaaggcatggtg
ctgcagaccgccggtaaacattacccggcaccgatgaccgcggtgaaaaccattgaagcc
gccgccaagctgggccgcgatgaggcactgaaactggaaaccgccagcttcgtgccgttg
gcacgatccaacgaagcgcgtgcgctggtcggcatcttccttaacgatcagttcgtgaaa
ggccaggcgaaaaagctggccaagaatgtggacgcgccgaaacaggcggcggtgctgggc
gccggcatcatgggcggtggcatcgcctaccaatcggcgctgaaaggcgtgccggtgatc
atgaaggacatcagcgacaaatcactgacgctgggcatgaacgaagcggccaagctgctc
aataagcagctggaacgcggcaaactggatggcctgaaaatggcgcaggtgctgtcgacc
attcaaccaacgttggactacgccggcatcgagcgcgcgcaggtgatcgtcgaagcggtc
gtggagaacccgaaggtcaaagccgccgtactgtcggaagtggaaaacctgatcggcgaa
gagaccgttctggcgtcgaacacctcgaccattccgattaatcacctggcaaaatcgttg
aagcgcccgcaaaacttctgcggcatgcacttctttaacccggtacaccgcatgccgctg
gttgaaatcatccgcggcgaacaaaccagcgacgagaccattgccaaagtggtggcctac
gccagccgcatgggcaaaacgccgatcgtggtgaacgactgcccgggcttcttcgtcaac
cgcgtgctgttcccatacttcgccggtttcagcctgctgctgcgcgacggcgccgacttc
cgtcagatcgataaagtgatggaaaaacagttcggttggccgatgggcccggcctacctg
ctcgacgtggtgggcatcgacaccgcacaccacgcgcaagcggtaatggcggccggcttc
ccggagcgcatgagcaaagactatcgcgatgccattgacgtgatgttcgacaaccagcgc
ttcggtcagaaaaaccagctgggcttctaccgctacagccaggacaacaaaggtaagccg
cgcaaggacaacgacgagcagaccgatgcgctgctggccgaagtgagccaaccgcgccag
accatcagcgacgaagagatcgttgcgcgcatgatgatcccgatgatcaacgaagtggtg
cgttgcctggaagagaagatcgtcgccagcccggcggaagccgatatggcactggtgtac
ggcatcggcttccctccgttccatggcggcgcattccgctacctggatacgctcggcacc
gccaactacgttgagctggcccagcgttacgcacacctcggcgccctgtatcaggtgccg
gccggtctgcgcgccaaggccgagcgcaatgaaagctactacccggtggcgacaccgctg
tccgacgtcgctacccgccaaccggcatga
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