Serratia marcescens subsp. marcescens Db11: SMDB11_4457
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Entry
SMDB11_4457 CDS
T03985
Symbol
groEL
Name
(GenBank) chaperone
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMDB11_4457 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smac03019
]
SMDB11_4457 (groEL)
03110 Chaperones and folding catalysts [BR:
smac03110
]
SMDB11_4457 (groEL)
03029 Mitochondrial biogenesis [BR:
smac03029
]
SMDB11_4457 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smac04147
]
SMDB11_4457 (groEL)
Enzymes [BR:
smac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SMDB11_4457 (groEL)
Messenger RNA biogenesis [BR:
smac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SMDB11_4457 (groEL)
Chaperones and folding catalysts [BR:
smac03110
]
Heat shock proteins
HSP60 / Chaperonin
SMDB11_4457 (groEL)
Mitochondrial biogenesis [BR:
smac03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SMDB11_4457 (groEL)
Exosome [BR:
smac04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SMDB11_4457 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
SMDB11_4457 (groEL)
Exosomal proteins of breast cancer cells
SMDB11_4457 (groEL)
Exosomal proteins of colorectal cancer cells
SMDB11_4457 (groEL)
Exosomal proteins of bladder cancer cells
SMDB11_4457 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF2712
Motif
Other DBs
NCBI-ProteinID:
CDG15016
UniProt:
A0ABC9IR99
LinkDB
All DBs
Position
4797460..4799106
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AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVVAAVEELKKLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMEKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGSVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTAGTV
ISEEIGLELEKATLEDLGQAKRVVINKDTTIIIDGVGDEATIQGRVAQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVAGKIASLKGDNEDQNVGIKVALRAMEAPLRQIVVNAGEEASVIANQVKAGEGSYGYNA
YSEEYGDMIAMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKADAPDLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggcaatgacgctcgcgtgaaaatgctccgcggcgtg
aatgttctcgctgatgcagtaaaagtgaccctgggcccgaaaggccgcaacgtagtgctg
gataaatctttcggcgcaccgaccatcaccaaagacggcgtttccgttgcgcgtgaaatc
gaactggaagacaagttcgagaacatgggcgcacagatggtgaaagaagtggcctccaaa
gcgaacgacgcggcgggcgacggcaccaccactgcaaccgtactggctcaatccatcatc
accgaaggcctgaaagcggttgctgcaggcatgaacccgatggatctgaagcgcggcatc
gacaaagcggttgtcgctgcggttgaagaactgaaaaaactgtccgtaccttgctccgat
tccaaagctatcgctcaggtcggcaccatctccgccaactccgacgaaaccgtgggtaaa
ctgatcgcggaagcgatggagaaagtgggcaaagaaggcgttatcaccgttgaagaaggc
accggcctgcaagacgagctggacgtggttgaaggtatgcagttcgaccgcggttacctg
tctccatacttcatcaacaagccggaaaccggttctgttgagctggaaagcccgttcatc
ctgctggccgacaagaagatctccaacatccgcgaaatgctgccggtgctggaagccgtt
gccaaagcaggcaaaccgctgctgatcatcgctgaagacgtagaaggcgaagcgctggcg
accctggtggtcaacaccatgcgcggcatcgtgaaagtggctgccgttaaggcgcctggc
ttcggcgaccgtcgtaaagccatgctgcaggacatcgctaccctgactgccggtaccgtt
atctctgaagagatcggtctggaactggaaaaagccaccctggaagatctgggtcaggcg
aaacgcgttgtcatcaacaaagacaccaccatcatcatcgatggcgtgggcgacgaagcg
accatccagggccgcgttgctcaaattcgtcagcagatcgaagaagcgacctctgactac
gatcgtgaaaaactgcaggagcgcgtagcgaaactggccggcggcgttgccgttatcaag
gttggcgcagccactgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgcaacccgcgccgcagtggaagaaggcgtggttgccggcggcggcgtcgcgctgatc
cgcgttgcaggcaaaatcgcctcgctgaaaggcgacaacgaagaccagaacgtgggtatc
aaagttgcgctgcgcgcaatggaagcccctctgcgtcagatcgtggtcaacgccggtgaa
gaagcttccgttatcgccaaccaggtgaaagcgggcgaaggcagctacggctacaacgct
tactctgaagaatacggcgacatgatcgcgatgggtatcctggatccaaccaaagtgacc
cgttctgctctgcagtacgcggcttccgtggctggcctgatgatcaccaccgaatgcatg
gtcaccgacctgccgaaggctgacgcaccggatctgggcgcagcaggcggcatgggtggc
atgggcggcatgggcggcatgatgtaa
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