Serratia marcescens subsp. marcescens Db11: SMDB11_4467
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Entry
SMDB11_4467 CDS
T03985
Symbol
frdA
Name
(GenBank) fumarate reductase, flavoprotein subunit
KO
K00244
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00020
Citrate cycle (TCA cycle)
smac00190
Oxidative phosphorylation
smac00620
Pyruvate metabolism
smac00650
Butanoate metabolism
smac00720
Other carbon fixation pathways
smac01100
Metabolic pathways
smac01110
Biosynthesis of secondary metabolites
smac01120
Microbial metabolism in diverse environments
smac01200
Carbon metabolism
smac02020
Two-component system
Module
smac_M00009
Citrate cycle (TCA cycle, Krebs cycle)
smac_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
smac_M00150
Fumarate reductase, prokaryotes
smac_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SMDB11_4467 (frdA)
00620 Pyruvate metabolism
SMDB11_4467 (frdA)
00650 Butanoate metabolism
SMDB11_4467 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
SMDB11_4467 (frdA)
00720 Other carbon fixation pathways
SMDB11_4467 (frdA)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SMDB11_4467 (frdA)
Enzymes [BR:
smac01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SMDB11_4467 (frdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
Thi4
GIDA
DUF6880
Lycopene_cycl
DAO
FabD_helical_ins
Myb_DNA-bind_6
Motif
Other DBs
NCBI-ProteinID:
CDG15028
LinkDB
All DBs
Position
complement(4806409..4808205)
Genome browser
AA seq
598 aa
AA seq
DB search
MQTFNADLAIIGAGGAGLRAAIAAAEANPQLKIALISKVYPMRSHTVAAEGGSAAVTQDH
DTFDYHFNDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSRKPDGSVNVRRFGGM
KIERTWFAADKTGFHMLHTLFQTSLKYPQIQRFDEHFVLDILVDDGQARGLVALNMMEGT
RVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGS
GILMTEGCRGEGGILVNKDGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWR
AGRTIATPRGDVVYLDLRHLGEKKLLERLPFICELAKAYVGVDPVKDPIPVRPTAHYTMG
GIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEHAARRALETAP
ANGSALDAQTRDVETRLSNLMKQEGNENWSKIRDEMGLSMEEGCGIYRTPELMQKTIDKL
AELKERFKRVNITDNTSVFNTDLLYTIELGYGLDVAECMAHSAFNRKESRGAHQRLDEGC
TERDDVNFLKHTLAFHNPQGAPRLEYSDVKITKLPPAKRVYGAEAEAQEKKNKEQANG
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaacctttaacgccgatcttgccattattggggccgggggcgctggtttacgtgca
gcaatagccgcagcggaagccaatccccaactgaaaatcgcgctgatctctaaggtctat
ccgatgcgcagccacacggtcgccgccgaggggggctccgccgccgtcacccaggatcac
gataccttcgactaccacttcaacgacaccgtcgccggcggcgactggttgtgcgagcag
gacgtggtcgatcacttcgtgcatcagtgcccgcgcgagatgacccagcttgagcaatgg
ggctgcccgtggagccgcaaaccggacgggtcggtcaacgtgcggcgcttcggcggcatg
aagatcgaacgcacctggttcgccgccgacaagaccggcttccacatgctgcacaccctg
ttccaaacctcgctgaaatacccgcagatccaacgcttcgacgagcacttcgtgctggat
atcctggtggatgacggccaggcgcgcggcctggtggcgctcaacatgatggaaggcacc
cgcgtgcagatccgcgccaacgcggtggtgatggccaccggcggcgccgggcgcgtttat
cgctacaacaccaacgggggcatcgttaccggcgacggcatgggcatggcgttccaccac
ggcgtaccgctgcgcgacatggagttcgtgcagtatcatccgaccggcctgcccggttcc
ggcatcctgatgaccgagggctgtcgcggcgaaggtggcatcctggtgaacaaagacggc
taccgttacctgcaagactacggcatgggtccggaaaccccgctgggcgagccgaagaac
aaatacatggagctgggcccgcgcgataaagtgtcccaggccttctggcatgaatggcgc
gccggccgcaccatcgccaccccacgcggcgacgtggtctacctcgatctgcgccacctg
ggcgagaaaaagctgctggagcggctgccgttcatctgcgaactggccaaggcctacgtc
ggcgtcgatccggtgaaagatccgatcccggtgcgccctaccgcgcactacactatgggc
ggcattgaaaccgaccagaactgtgaaacccgcatcaaggggctgttcgcggtcggcgag
tgctcctccgtcggcctgcacggcgccaaccgcctcggctccaactcgctggcggaactg
gtggtgttcggccgcgtcgccggtgaacacgccgcgcgccgcgcgctcgagaccgcgccg
gccaacggcagcgcgctggatgcgcaaacccgcgacgtcgaaacccgcctgagcaacctg
atgaagcaggaaggcaacgaaaactggtcgaagatccgcgacgaaatggggctgtcgatg
gaagaaggctgcggcatctaccgcacgccggagctgatgcaaaaaaccatcgataagctg
gccgagctgaaagagcgtttcaagcgcgtcaacatcaccgacaacaccagcgtcttcaat
accgatctgctgtacaccatcgagctgggctacggcctggacgtcgccgaatgtatggcg
cactccgcgtttaaccgcaaagagtcgcgcggcgcccatcagcgcctggacgaaggctgc
accgagcgtgacgacgtcaacttcctcaagcatacgctggcgttccataacccgcagggc
gcgccgcgtctcgaatacagcgacgtgaaaatcaccaagctgccgccggccaaacgcgtc
tacggcgcagaagccgaagcgcaggagaaaaagaataaggagcaggcaaatggctga
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