Serratia marcescens subsp. marcescens Db11: SMDB11_4531
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Entry
SMDB11_4531 CDS
T03985
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00550
Peptidoglycan biosynthesis
smac01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SMDB11_4531 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smac01002
]
SMDB11_4531 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smac01011
]
SMDB11_4531 (dacB)
Enzymes [BR:
smac01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SMDB11_4531 (dacB)
Peptidases and inhibitors [BR:
smac01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
SMDB11_4531 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
smac01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SMDB11_4531 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
CDG15092
UniProt:
A0ABC9IQF7
LinkDB
All DBs
Position
complement(4872284..4873717)
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AA seq
477 aa
AA seq
DB search
MRFSRIVSALACAFVLNANAAPVEEYTQYLPDGANLALVVQKIGAGAPTIDYHSQQMALP
ASTQKVLTALAALLQLGPDYRFTTTLESQGDIRDGVLRGNLIARFSGDPTFKRQSLRNMV
AVLKKQGVRQISGDVLVDTSVFASHDKAPGWPWNDLTQCFSAPPAAAIVDRNCFSVSLYS
APNPGDMAFIRVASYYPVNMFSQVRTLARGSADAQYCELDVVPGELNRFTLTGCLTQRSE
PLPLAFAIQDGASYAGAILKDELTQAGIQIDGHLKRQTRPGITGTVIAQTQSAPLHDLLK
IMLKKSDNMIADTVFRTIGHERFGVPGTWRAGSDAVRQVLRQKAGIDLGNTIIADGSGLS
RHNLLAPATMMQALQYIAQHDNELNFISMLPLSGYDGTLRYRGGLHEAGVDGKVSAKTGA
LQGVYNLAGFITTASGQRMAFVQYLSGYAVPPEDQKQRRAPLVRFESRLYRDIYQNN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttcacgaattgtcagtgcattggcttgcgcatttgttctgaatgcgaatgcg
gccccggttgaagagtacacacaatatctgcctgatggggccaaccttgccctggtcgtt
cagaaaatcggtgccggcgcgccgacgatcgattatcactctcagcagatggcgctgccg
gccagtacccaaaaagtgctgaccgcgctggcggccttgctgcaactcgggcccgattac
cgtttcaccaccacgctggagagccagggcgatatccgcgatggcgtgctgcgcggcaac
ctgatcgcccgcttcagcggcgatccgaccttcaagcgccagagcctgcgcaatatggtg
gccgtcctgaagaaacagggcgtgcgccaaatcagcggcgacgtgctggtcgatacctcg
gtcttcgccagccatgacaaggcgcccggctggccgtggaacgatctgacgcagtgcttc
agcgcgccgccggccgccgccatcgtcgatcgcaactgtttctcggtctcgctgtacagc
gcgccgaatccgggcgacatggcgtttatccgcgtcgcctcctattatccagtcaatatg
tttagccaggtgcgcaccctggcgcgcggctcagcagacgcgcagtactgcgagctggac
gtggtgccgggcgaactgaaccgctttaccctgaccggctgcctgacgcaacgcagcgaa
ccgctgccgctggccttcgccatccaggacggcgccagctatgcgggcgcaatcctgaaa
gacgaactgacccaggccggtatccagatcgacgggcacttgaaacgccagacgcgtccc
ggcatcaccggcacggtaatcgcgcaaactcagtcggcgccgctgcacgatctgttgaag
atcatgctgaagaaatcggacaacatgatcgccgataccgtcttccgcaccatcggccac
gagcgcttcggcgtaccgggcacctggcgagcgggctccgatgcagtgcggcaggtgctg
cgccagaaggccggcatcgatctgggcaataccattatcgccgacggttccggcctgtcg
cgccacaacctgctggcgccggcgactatgatgcaggcgctgcagtacatcgctcagcac
gacaacgagctgaacttcatctcgatgctgccgctgtccggctatgatggcaccctgcgc
taccgcggcggcctgcacgaagccggcgtcgacggcaaggtgtcggccaagaccggtgca
ctgcagggcgtctacaacctggcgggcttcatcacgaccgccagcggccagcgcatggcc
ttcgtgcagtatctctccggctacgccgtgccgccagaagatcagaaacagcgccgcgcg
ccgctggtgcgcttcgaaagccgcctgtatcgggacatttaccaaaacaactga
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