Serratia marcescens subsp. marcescens Db11: SMDB11_4543
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Entry
SMDB11_4543 CDS
T03985
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smac03016
]
SMDB11_4543 (truB)
Enzymes [BR:
smac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SMDB11_4543 (truB)
Transfer RNA biogenesis [BR:
smac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SMDB11_4543 (truB)
Prokaryotic type
SMDB11_4543 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CDG15104
UniProt:
A0ABC9IQU7
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All DBs
Position
4886129..4887073
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGQIVQERPVNFTQAQLDAALDTFRGDIQ
QVPSMYSALKYQGKKLYEYARQGIEVPREARSITVYELQFIRWEGDELELEIHCSKGTYI
RTITDDLGELLGCGAHVIYLRRLQVATYPIARMVTLEQLNALLAQAQEQEIAPGELLDPL
LMPMDSPVENYPEVNLLPVVAGYVKQGQPVQVAGAPASGLVRITEGEERKFIGVGDIAED
GRVAPRRLVVEHFD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccctcgtcgccgcggccgtgacatccacggcgtgctgttgctggacaagccg
caggggttgtcgtccaacgatgcgctgcaaaaagtaaaacgtctgtacaacgccaaccga
gcgggccataccggcgcgctcgatccgttggcgaccggcatgctgcctatttgcctgggc
gaagcgaccaagttttcgcaatacctgctcgattccgacaagcgctatcgggtgatcgcc
aagctggggcagcgtaccgatacctccgacgccgacggccagatcgtgcaggagcgcccg
gtgaattttacccaggcgcagctcgacgcggcgctggacaccttccgcggcgacatccag
caggtgccgtcgatgtattcggcgttgaaataccagggcaagaaactctacgagtatgcg
cgccaggggattgaagtgccgcgcgaagcgcgcagcatcacggtgtacgagctgcagttt
atccgctgggaaggggatgagctggagctggagatccactgctcgaaaggcacctacatc
cgcaccatcaccgacgatctcggcgagctgctgggctgcggcgcgcacgtgatctatctg
cgccgcctgcaggtggcgacttatccgattgcgcgcatggtgacgctggaacagctgaac
gctttgctggcgcaggcgcaggaacaagaaatcgcgcccggcgagctgctcgatccgctg
ctgatgccgatggacagcccggttgagaactatccggaagtgaatttgctgccggtggtc
gcgggttacgtcaagcaggggcaaccggtgcaagtcgccggcgcgccggcttccggcctg
gtgcgtatcaccgagggtgaagagcgaaaattcatcggcgttggcgacatcgccgaggat
ggtcgcgtggcgccgcgccgcctggtggtcgagcatttcgactga
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