Serratia marcescens subsp. marcescens Db11: SMDB11_4614
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Entry
SMDB11_4614 CDS
T03985
Symbol
holC
Name
(GenBank) DNA polymerase III, chi subunit
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac03030
DNA replication
smac03430
Mismatch repair
smac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMDB11_4614 (holC)
03430 Mismatch repair
SMDB11_4614 (holC)
03440 Homologous recombination
SMDB11_4614 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smac03032
]
SMDB11_4614 (holC)
03400 DNA repair and recombination proteins [BR:
smac03400
]
SMDB11_4614 (holC)
Enzymes [BR:
smac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMDB11_4614 (holC)
DNA replication proteins [BR:
smac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SMDB11_4614 (holC)
DNA repair and recombination proteins [BR:
smac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SMDB11_4614 (holC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
CDG15176
LinkDB
All DBs
Position
complement(4968578..4969027)
Genome browser
AA seq
149 aa
AA seq
DB search
MKQATFYLLDNAEPSGALSAHEAVACAVAASGFRSGKRVLIACESQEQAQRLDEALWQRE
PHEFVPHNLAGEGPHYGAPVELCWPGKRGNAPRDLLIALLPQFADFATAFHEVVDFVPYE
DTLKQLARDRYKAYRSVGFHLTTATPPTH
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggcgacgttttatttgctcgacaacgcggaaccgtcaggcgcgctcagcgcc
catgaggccgtggcctgcgccgttgccgccagcggcttccgttccggcaagcgggtgctg
atcgcctgcgagagccaggagcaggcccagcggctggacgaagcgctgtggcagcgcgag
ccgcatgaattcgtgccgcacaatctggccggcgaagggccgcactacggcgcgccggtg
gaactgtgctggcccggcaagcgcggcaatgccccgcgcgatctgctgatcgccctgctg
ccgcagtttgccgattttgctaccgctttccatgaagtggtagacttcgttccttacgaa
gacactctgaaacagttggcgcgcgaccgttacaaggcctatcgcagcgtcggcttccat
ttgaccacggctacgccgccaactcactga
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