Serratia marcescens subsp. marcescens Db11: SMDB11_4684
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Entry
SMDB11_4684 CDS
T03985
Name
(GenBank) LysR-family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
smac
Serratia marcescens subsp. marcescens Db11
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smac03000
]
SMDB11_4684
Transcription factors [BR:
smac03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SMDB11_4684
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
HTH_11
HTH_20
Motif
Other DBs
NCBI-ProteinID:
CDG15242
LinkDB
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Position
5034373..5035302
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AA seq
309 aa
AA seq
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MQVKKRALLGQLSDMDLRLLRVFKAVVDCGGMSAAELELNISLSTISKHIKDLEQRLGLT
LCQRGREGFAVTDEGLLIYQETVNLLAATEAFRRGVDEVHQRMGGQLHVAIFDHTVSNPQ
AQIGRAIALFSERAPEVSLQMYVEPINTIERGVIDGQFQVGVIPMHRSAESLSYHSLFSE
RMFLYCGAQHELFSGPHETLNWDLLHNYAFAGLGYHSPNMELSLQQHLHRKATGFAQESI
ATLILSGKYVGFLPDHYAAFFVAQNMMRAIKPALFRYHCEYSSVLRRSPVPQRVVKLFHE
CLLAAHGTA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaaaaaagcgcgcgctgttagggcaattgtcggatatggatctgcgtttgctg
cgggtattcaaggccgtggtcgactgcggcggcatgagcgccgccgaactggagctgaat
atcagcctgtcgaccattagcaagcacatcaaggatctggagcagcggctgggcctgacg
ctgtgccagcgcgggcgcgagggttttgcggttaccgacgaggggctgttgatctatcag
gaaacggtcaacctgctggcggccaccgaggcgttccggcgcggggtggacgaggtgcac
cagcgcatgggcgggcagctgcacgtggcgatattcgaccatacggtcagcaatccgcag
gcgcagatcggccgggccatcgcgttattcagcgagcgtgcgccggaggtttctttgcaa
atgtacgtggagccgattaataccattgaacgcggcgtcattgacgggcaatttcaggtt
ggcgttattcccatgcaccgcagcgcggaaagtttatcttatcattcgttattcagtgag
aggatgttcttatattgcggcgcgcagcatgaattattttccggcccccatgaaacatta
aattgggatctgctgcacaattatgccttcgccggattaggctatcattcgccgaatatg
gaactgagcctgcagcaacatttgcatcgcaaggcgacggggtttgcgcaggagtcgatc
gccacgctgatcctgtccggcaaatacgtcggctttttgcctgatcactacgcggcgttt
ttcgtggcgcagaatatgatgcgggcgatcaaaccggcgctgttccgctatcactgtgaa
tactccagcgtgctgcgccgctcgccggtgccgcagcgggtggtgaagctgttccatgag
tgcctgctggcggcccacggaacagcgtga
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