Stieleria magnilauensis: TBK1r_10020
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Entry
TBK1r_10020 CDS
T10880
Symbol
groL_1
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
smae Stieleria magnilauensis
Pathway
smae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TBK1r_10020 (groL_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smae03019
]
TBK1r_10020 (groL_1)
03110 Chaperones and folding catalysts [BR:
smae03110
]
TBK1r_10020 (groL_1)
03029 Mitochondrial biogenesis [BR:
smae03029
]
TBK1r_10020 (groL_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smae04147
]
TBK1r_10020 (groL_1)
Enzymes [BR:
smae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
TBK1r_10020 (groL_1)
Messenger RNA biogenesis [BR:
smae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
TBK1r_10020 (groL_1)
Chaperones and folding catalysts [BR:
smae03110
]
Heat shock proteins
HSP60 / Chaperonin
TBK1r_10020 (groL_1)
Mitochondrial biogenesis [BR:
smae03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
TBK1r_10020 (groL_1)
Exosome [BR:
smae04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TBK1r_10020 (groL_1)
Exosomal proteins of other body fluids (saliva and urine)
TBK1r_10020 (groL_1)
Exosomal proteins of breast cancer cells
TBK1r_10020 (groL_1)
Exosomal proteins of colorectal cancer cells
TBK1r_10020 (groL_1)
Exosomal proteins of bladder cancer cells
TBK1r_10020 (groL_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QDV82077
UniProt:
A0ABX5XJX7
LinkDB
All DBs
Position
complement(1326011..1327636)
Genome browser
AA seq
541 aa
AA seq
DB search
MSKIIAFEQDAREAMRRGVHKLAKTVRSTLGPGGHNVIIQKSYGSPIVTRDGVTVAKEIE
LDDPYENMGARMVREVASKTNDVAGDGTTTATVLAEAIFNEGLRAVVAGTNPIAMKQGIE
QAVEDIVGHLKSMSTTVKGRKEMEQVARISGNQDAKIGQVVADAMEKVGKDGVVTIDEGK
SLETEVKWVEGMQFDKGYLSPYFVTSPETMECVLEEPYILIHEKKISNLRDFVPLLEKVA
KTGKALLIIAEDVEGEALATLVVNRLRGTFVAAAVKAPGYGDRRKAMMEDMAILTGGKAF
FESLGVKLENIELADLGRAKKVIIDKDNTTIIEGAGKTDDIKARIKQIETEHEKSTSDYD
REKLQERKAKLVGGVAKISVGGATEAEVKEKKMRFEDALSATRAAVEEGILPGGGVALVR
AASRCDASKLSDDQRTGYNIVLKACRAPATWIAENAGQDGSLVCEKVAAEDGNYGYNAAT
NTYEDLVESGVIDPTKVVRTALENASSVSTLLLTSDALIAEKPKDESKFGKKGHGGDYDM
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatcattgcctttgaacaagatgcccgcgaggcgatgcgtcgcggggttcac
aagttggccaaaaccgtccgcagcaccctcgggcccggcggacacaacgtgatcattcag
aagagctacggatcgccgatcgtgacccgcgacggcgtgacggtggccaaagaaatcgaa
ctggatgacccctatgaaaacatgggggcgcggatggtgcgcgaagtcgcttcgaagacc
aacgacgtggcgggcgacggcacgaccaccgcaacggtgttggccgaagcgatcttcaat
gaagggctgcgggccgtcgtcgccggcaccaatccgatcgcgatgaaacaggggatcgag
caagccgtcgaagacattgtcggtcacctcaagtcgatgtcgaccaccgtcaaaggccgc
aaagagatggagcaagtcgctcggatcagcggcaaccaagacgccaagatcggtcaagtc
gttgccgatgcgatggaaaaggtcgggaaagacggcgtggtcacgatcgacgaaggcaag
agtctggaaacagaggtcaagtgggtcgaagggatgcaattcgacaagggctatctgtcg
ccctacttcgtgacttcaccggaaacgatggagtgcgtgctcgaagaaccgtacatcctg
attcatgaaaagaagatcagcaatctgcgcgacttcgtgccgttgctggaaaaggtggcc
aagaccggcaaggcgttgttgatcatcgccgaagacgtcgaaggtgaagcgctggctacc
ctggtggtcaaccgcttgcgcggaacctttgtcgctgcggcggtgaaggctcccggatac
ggtgaccgccgcaaggccatgatggaagacatggcgatcctgaccggcggcaaagcgttc
ttcgaaagtctcggtgtcaaactcgaaaacatcgaactggccgatctcggacgtgccaag
aaagtcatcatcgacaaagacaacacgacgatcatcgaaggcgccggaaagaccgacgac
atcaaggcccggatcaagcagatcgaaacggagcacgaaaaatcgaccagcgactatgat
cgcgagaagctgcaagagcgaaaagcgaaactggtcggtggcgttgccaagatcagcgtc
ggcggcgcaaccgaagccgaggtcaaggaaaagaaaatgcgtttcgaagacgccttgtcg
gctacccgcgcggcggtcgaagaaggcatcctgcccggcggcggcgtggccttggtgcgc
gcggccagccgctgcgacgcatccaaattgtccgatgaccaacggacgggctacaacatc
gtgctcaaagcctgtcgcgcaccggccacctggatcgccgaaaacgccggtcaagatggt
tcgctggtttgtgagaaagtggctgccgaagacggcaattatggctacaacgctgccacc
aacacctacgaagacctggtcgaatccggcgttatcgaccccaccaaagtggtccggacc
gcactcgaaaatgcctccagcgtctcgacgttgctgttgaccagcgacgccctgatcgct
gaaaagccgaaagacgaaagcaagttcggcaagaaaggccacggcggcgactacgacatg
tactag
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