Stieleria magnilauensis: TBK1r_10450
Help
Entry
TBK1r_10450 CDS
T10880
Symbol
rutR
Name
(GenBank) HTH-type transcriptional regulator RutR
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
smae Stieleria magnilauensis
Brite
KEGG Orthology (KO) [BR:
smae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smae03000
]
TBK1r_10450 (rutR)
Transcription factors [BR:
smae03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
TBK1r_10450 (rutR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_41
TetR_C_11
TetR_C_24
HTH_22
Motif
Other DBs
NCBI-ProteinID:
QDV82120
LinkDB
All DBs
Position
complement(1372123..1372767)
Genome browser
AA seq
214 aa
AA seq
DB search
MPGKSKPQSVSREKEPRDRLTDRKRASIVQAAVEAFQQYGYFAASMNGIADAASVSKRTL
YNHFDSKEALFDAIVEELKFRVERLPECEFDASRGLVEQLTELAQTEIDFFTSEDVQALS
RAGLSRVLGEPDAGQQVDQRFFIRRVTTWMKQAQASGCLLEADAEFAAMQFVGLLRTFAF
WPIIVHGEPPPSGRKRNQIVAHTVEMFLSRYAVH
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgcccggaaaaagtaaaccccagagtgtaagtcgcgaaaaagagccgcgggaccgactg
acggatcgcaagcgagcgtcgatcgtgcaagccgcggtggaggcgtttcaacagtacggc
tatttcgccgccagcatgaatggcatcgctgacgccgcatcggtcagtaagcgaaccctg
tacaaccacttcgacagcaaggaagccctgtttgatgcgattgtcgaggagttgaagttt
cgcgtcgagcgacttccggagtgcgagttcgacgcttcgcgaggcctcgtcgagcaattg
acggaacttgcgcagaccgaaatcgacttcttcacgtcggaggacgttcaggctctttcc
cgagccggattgtcgcgtgtgctgggcgaaccggatgctggccaacaggtcgatcaacgc
ttttttatcaggagagtgacgacatggatgaagcaggcgcaggcatccggttgccttctc
gaagccgacgcagagttcgcagcgatgcaattcgtcggcttgctgcgcaccttcgcgttc
tggccgatcattgtccacggcgagcccccgccctcaggccgcaaacgaaatcagatcgtc
gcgcacacggttgaaatgtttctcagcagatatgcagtgcactga
DBGET
integrated database retrieval system
