KEGG   Stieleria magnilauensis: TBK1r_16320
Entry
TBK1r_16320       CDS       T10880                                 
Name
(GenBank) hypothetical protein
  KO
K03628  transcription termination factor Rho
Organism
smae  Stieleria magnilauensis
Pathway
smae03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smae00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TBK1r_16320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smae03021]
    TBK1r_16320
   03019 Messenger RNA biogenesis [BR:smae03019]
    TBK1r_16320
Transcription machinery [BR:smae03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     TBK1r_16320
Messenger RNA biogenesis [BR:smae03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     TBK1r_16320
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N Spore_III_AA S1CSD-TOTE-2 NACHT DUF6887 AAA
Other DBs
NCBI-ProteinID: QDV82700
UniProt: A0ABX5XMV0
LinkDB
Position
2193739..2195253
AA seq 504 aa
MQSNRPSGDEHRADDRGPKRHGGSRDYSSHRRQRQQRHPDKVVDRRIRELDAERDPLSLP
EEIVSEATKVGQRVGIPSGGDGPQLNLAQLQEMEDSKLFEMAREDAIPDFEMMTKQELIF
AVLKHRMKVGGLMYGEGTLEILPDGFGFLRSSKHHYVSCPDDIYVSPSQIRRFGLQTGSH
VAGQIRPPKENERYFALLRIEAINRRDPSQRNAAIPFEDLTPLHPDRRIMMEHEGGEMST
RVVDMLTPIGFGQRGLIVSPPRAGKTVLMQNMARAVLANYPEAYVFILLIDERPEEVTDM
EREVRGPQCEVISSTFDEPAQRHIQVAQMVIEKAKRMVEAGVDVVVFLDSITRLARAHNS
DGESTGKLLSGGLDAGAMQKPKSIFGSARKTEEGGSLTIIATALVDTGSKMDDVIFEEFK
GTGNLEIVLDRALVDRRIWPAIDISRSGTRREEMLLDKEEFKRISAVRRALSEVSPVDAM
DDLIKRLKKTQNNAEFLLSVKDVD
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgcaatccaatcggccttcgggcgacgaacaccgcgctgatgatcgcggaccaaaacgt
catggcggatcacgtgattattccagtcaccgccggcaacgccaacaacgacatccggac
aaggtcgtcgatcgacgtatccgcgaactcgacgcagaacgagatccgctctcgctgccc
gaagagatcgtcagcgaagcgaccaaggtcggacaacgcgtcgggattccctccggcggc
gacggtccccagctgaacctggcccagttgcaggagatggaggactcgaaactgtttgaa
atggctcgcgaagacgcgatccccgactttgagatgatgacgaagcaggagctgatcttt
gccgtcttgaagcaccgcatgaaagtcggtggtttgatgtatggcgaagggacgctggag
atcctgcccgacgggttcgggtttctgcggagcagcaaacatcattacgtctcgtgtccc
gacgacatctatgtttcgcccagccaaattcgacgcttcggactgcaaaccggcagccat
gtcgccggccagatccgtccgcccaaagaaaatgaacgctatttcgccctgctgcgaatc
gaggcgatcaatcgacgcgacccctcgcaacgcaacgccgcgatcccgtttgaggacctg
acgccgttgcatcccgatcgtcggatcatgatggagcacgaaggcggcgagatgtccaca
cgcgtggtcgacatgttgacgccgatcgggtttggacaacgtggtttgatcgtcagccca
ccccgcgccggcaaaaccgtgctgatgcaaaacatggctcgcgcggtcctggcaaactat
cccgaagcctatgtgtttattctgctgatcgatgaacgtcccgaagaagtgacggacatg
gaacgcgaagtccgtgggccgcagtgcgaagtcatcagcagcacgtttgacgaacccgcc
cagcgacacatccaagtcgctcagatggtgatcgaaaaagccaaacggatggttgaagcc
ggcgtcgacgtggtcgtcttcctcgattcaatcacgcggctggcccgggcccacaacagt
gacggcgaatccaccggcaagttgctcagcggcggtctggatgccggcgcgatgcagaaa
cccaagtcgatctttggctcggcccgaaaaaccgaagagggcgggtcgctgacgatcatc
gccaccgcgttggtcgacaccggtagcaagatggatgacgtgatctttgaggaattcaaa
gggaccggaaatctggaaatcgtcttggaccgggcgttggtggatcgacggatctggccg
gcaatcgacatcagccgaagcggcacgcgccgcgaagaaatgctgctggacaaagaggag
ttcaaacggatctctgcggtgcgacgcgcgttgtccgaggtctcgccggtcgatgccatg
gacgacctgatcaaacggttgaaaaagacacagaacaatgccgagtttttgctgagcgtg
aaggatgttgactga

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