Stieleria magnilauensis: TBK1r_19680
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Entry
TBK1r_19680 CDS
T10880
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
smae Stieleria magnilauensis
Pathway
smae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TBK1r_19680 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smae03019
]
TBK1r_19680 (recQ_2)
03400 DNA repair and recombination proteins [BR:
smae03400
]
TBK1r_19680 (recQ_2)
Enzymes [BR:
smae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TBK1r_19680 (recQ_2)
Messenger RNA biogenesis [BR:
smae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TBK1r_19680 (recQ_2)
DNA repair and recombination proteins [BR:
smae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TBK1r_19680 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HTH_40
RecQ_Zn_bind
ResIII
EF_HAND_2_PLCG
Motif
Other DBs
NCBI-ProteinID:
QDV83035
UniProt:
A0ABX5XPY6
LinkDB
All DBs
Position
complement(2648699..2650612)
Genome browser
AA seq
637 aa
AA seq
DB search
MDDVRCVLKNVWGYDSFRPLQEQSIETILAGRDSLTVLPTGAGKSICFQAPALCNNGSRS
DGRHSDGRHSDGRHSDGPRDQGLAVVVSPLISLMKDQVDALREKRVPAALINSTQNETEK
REVAERIRRGELRLLYLAPERLLSPKTLGFLRQQQCVRYFAIDEAHCVSQWGHDFRPEYQ
QLKTLKQVFPEASVHAFTATASQPVRRDIARQLGLCEPSFLIGNFDRPNLTYRMIRSRQK
MQQIMEVVNRHRGQSGIVYCLSRREVDTTTQALRTLGLKAKPYHAGLTAPQRKANQDSFM
QGRCDIVVATIAFGMGIDKANIRFVIHTGMPKSVEHYQQESGRAGRDGLDAECVLLHSPR
DFLIWSDVMHGEAGQVARDSLQAMFELCNDVKCRHKAIVEYFGQDYGVMRCGACDVCLGE
LELHDQSSDIARTVVACVQELKQKYGAGHVARVLAGKSDKRIFQSNHDRLNSFGALGDHG
PMAIKVWIQQLISQKYLRRSGSYKTLAPTESGRRLLRGQGTPKLTATGRSKKSADGSVSF
VPAISSLAAFDYFRSGDSIESVAQKMSRAQSTIVKYLADYIRHHGINDPTLWVKPESAQR
VLANKHLAGDGKMKPIFDHLGGEVSYDEIRITLACDG
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgtacggtgtgtgttgaagaacgtttggggctacgattcatttcgcccgctt
caagagcagtcgattgagaccattctcgctggccgtgacagcttgacggtgctgcccacc
ggagccggcaagtcgatttgctttcaagccccggcactgtgtaacaatggttcccgcagt
gacggccgccacagtgatggccgccacagtgacggccgccacagtgacggcccgcgcgac
caggggcttgcggtcgtcgtctcgccgctgatttcgttgatgaaggaccaggttgatgcg
ctgagggaaaagcgagttccggcggcgctgatcaacagcacgcaaaacgaaacggaaaag
cgggaggttgccgaacgaattcgtcgcggcgaacttcgattgctgtacctggcccccgaa
cgcttgctctcgcccaagacgctcggtttcttgcgtcagcagcaatgtgtccgctatttc
gcgatcgatgaagcacactgcgtcagccaatgggggcacgattttcgcccggagtatcag
cagctcaagacgctcaagcaggtgttccccgaggcgtccgttcatgcgttcaccgcaacg
gcttcgcagccggtccgccgtgacatcgctcgccagctggggctttgcgagccgagtttt
ctgatcggaaattttgatcgcccgaatctgacgtatcggatgatccgctctcggcaaaag
atgcagcagatcatggaggtcgtcaatcgtcaccggggccagtcgggtatcgtgtattgt
ctcagccgtcgcgaagtcgatacgacgacccaggcgttgcggacgctggggttgaaagcc
aaaccgtaccacgccggcctgaccgcgccgcagcggaaggcgaaccaagacagtttcatg
cagggtcgctgcgacatcgtcgtcgccacgatcgcctttggcatgggaatcgacaaagcg
aatattcggtttgtgattcacaccgggatgcccaagtccgtcgaacactaccagcaggaa
agcggtcgagccggtcgcgacgggctggatgcggagtgcgtgttgctgcacagtccacgt
gacttcctgatctggagcgacgtgatgcacggcgaagccggtcaagtcgcccgagattcg
ctacaggccatgtttgaactctgtaacgacgtcaaatgtcggcataaagcgatcgtcgaa
tacttcggacaggactacggcgtgatgcgttgcggcgcctgtgatgtttgcctgggcgag
ttggaattgcacgaccagtcgtccgacatcgcgcgaaccgttgtcgcgtgcgtgcaggag
ttgaaacaaaagtacggtgccggacatgtcgcccgcgtgctggcgggaaaatccgacaaa
cgtatcttccagtccaatcacgaccggctgaacagtttcggcgccctcggcgaccatggt
ccgatggcgatcaaagtgtggatccaacagctgatcagccagaaatacctccgtcgcagt
ggctcctacaaaacgctggcgccgaccgaatcaggccggcgtctgctgcgtggtcaaggg
acgcccaagttgacggccaccggacgcagcaagaagtctgccgatgggagtgtctccttc
gtccccgccatcagctcattggccgcgtttgattactttcgttcgggcgattcgatcgaa
tcggtcgctcaaaagatgtcccgcgcccaaagcacgatcgtcaagtatctggccgattac
atccggcaccacggcatcaatgatccgacgctctgggtgaaacctgaatcagcccaacgc
gtcttggcaaacaagcatttagccggcgacggaaaaatgaaaccgatctttgatcacttg
ggcggcgaagtcagttacgacgaaatccgtatcaccctggcgtgtgacggatag
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