Stieleria magnilauensis: TBK1r_21990
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Entry
TBK1r_21990 CDS
T10880
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
smae Stieleria magnilauensis
Pathway
smae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TBK1r_21990 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smae03400
]
TBK1r_21990 (alkA)
Enzymes [BR:
smae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
TBK1r_21990 (alkA)
DNA repair and recombination proteins [BR:
smae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TBK1r_21990 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
DUF1127
Motif
Other DBs
NCBI-ProteinID:
QDV83263
LinkDB
All DBs
Position
complement(2974620..2975276)
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AA seq
218 aa
AA seq
DB search
MSRPPQRKPIRLTKTTLAEGAVRLAKADPVLGKIHRTFGPPPLLRRPATYATFVHIILEQ
QVSVESAKATFDRLVGRCQNEVSPRAVRDLGDRRLRDLGFSRQKARYTLALADACLAGDF
DIDALTRWDDETVRSQIVSQLGLGNWSADVFLMMALQRPDILPLGDLALVKGIQEIDQTQ
YESSQQIAERAESWRPLRSIATRMVWQWYVHQRGRDIF
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
ttgagccgacccccacagcgcaagccgattcgtctgaccaaaacgacgcttgcggagggg
gcggtccggctggccaaggcggatccggtgctgggcaagatccatcgcacgtttgggccg
ccgccgttgctgcggcgaccggcgacgtacgccaccttcgtccacatcattctcgaacaa
caggtctccgtcgaatcggccaaggcgaccttcgaccggctggtcggtcgctgccagaat
gaagtgagcccccgcgcggtccgtgatttgggcgaccggcgtttacgcgacttggggttc
agtcgccagaaggcccgttacacgcttgcgttggccgacgcctgtctcgccggcgacttt
gatatcgacgcgttgacgcgatgggacgacgaaacggttcgctcgcaaattgtctcgcaa
ctgggactgggaaattggtcggccgatgtgtttttgatgatggcactgcagcggcccgac
atcctgcccctgggcgatttggcgctcgtcaaaggcattcaagaaatcgaccagacgcaa
tacgaatcgagtcagcagattgccgagcgtgccgaatcgtggcggccgcttcgcagtatt
gccacacgaatggtctggcaatggtatgttcatcaacgcggacgcgatatcttttag
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