Stieleria magnilauensis: TBK1r_24640
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Entry
TBK1r_24640 CDS
T10880
Symbol
recQ_3
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
smae Stieleria magnilauensis
Pathway
smae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TBK1r_24640 (recQ_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smae03019
]
TBK1r_24640 (recQ_3)
03400 DNA repair and recombination proteins [BR:
smae03400
]
TBK1r_24640 (recQ_3)
Enzymes [BR:
smae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TBK1r_24640 (recQ_3)
Messenger RNA biogenesis [BR:
smae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TBK1r_24640 (recQ_3)
DNA repair and recombination proteins [BR:
smae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TBK1r_24640 (recQ_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
TetR_C_25
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QDV83522
LinkDB
All DBs
Position
complement(3369563..3371002)
Genome browser
AA seq
479 aa
AA seq
DB search
MNAPPPKELLRRFYGYDDFRPGQAEIIEHVLAGGHAMVVMPTGMGKSLCYQIPALSSVDD
DRSIVLVLSPLIALMQDQVDSLQRRGIDAGFINSSLDRETRLARYEALAQGQYKILFVTP
ERFRKDDFCEALSRRTVRLLAIDEAHCVSQWGHDFRPDYTRVAEIRASIGEPTTLALTAT
ATAECRRDIYRQIGIDASQVKLFHQGIDRPNLHLDVIPVYDEEEKLNQLRDILRDPEYRS
GSAIVYFSLIKTLERFSDHLLSEGIDHVCYHGDLPRNQRRRVQDEFMSGDADLVLATNAF
GMGIDKEDIRMVVHAETPGSIESYYQEIGRAGRDGQPSRCVWLYAQEDLMTQMQFIEWSN
PDAAFYTRLYQLMAEHGEQCRAFGLEWMNAQLQRRSKHDHRIATAISILDRHGVVAGPRP
PQCFEVCAPLPARFQDDDQLAEKKRRDQQRLYAMVQFAAEQGDRKQFLNRYFADPEASG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgccaccccccaaggaactcctccgccgattctacggctacgatgactttcgc
cccggacaggcagagatcatcgaacacgttttagcgggggggcacgccatggtcgtgatg
ccgaccggcatgggaaaatcgctctgttaccagattccggcactgtcaagtgtcgacgat
gaccgctcgatcgtgttggtgctttcccccttgatcgcgttgatgcaggaccaggtcgat
tcgctgcagagacggggaatcgatgccggtttcatcaattcatcgttggatcgcgaaacg
cggttggcgcgttatgaagccttggcccaaggacagtacaagattctgtttgtcactccg
gagcgttttcgcaaagacgatttctgcgaggccctgtcacgccggacggtccgtctgttg
gcgattgatgaagcgcattgtgtcagccagtggggacacgattttcgccccgactacacg
cgggtggccgaaatccgcgcgtcgatcggtgagcccaccacgcttgcgttgaccgcgacg
gcgacggccgagtgccgccgagacatttaccgccagatcggcatcgatgcgtcacaagtc
aaactgtttcaccaaggcatcgatcgcccgaacctgcatttggatgtgatcccggtctat
gacgaagaagaaaaactgaatcagctccgcgacatccttcgcgatcccgagtaccgctcc
ggcagcgccatcgtttacttttcgttgatcaaaacactggagcgtttcagcgatcacttg
ctgtccgaaggaattgatcacgtctgttaccacggcgatttgccacgcaaccagcgccgg
cgtgtccaggacgaattcatgtccggcgatgccgatctggtgttggcgaccaacgcgttc
ggcatgggcatcgataaggaagacatccgcatggtcgtgcatgcggagacccccggttcg
atcgagtcctattatcaagagatcggacgtgccggtcgcgacgggcagccgagtcggtgc
gtgtggttgtacgcgcaagaggacttgatgacccagatgcaattcatcgaatggtccaat
cccgatgccgccttctacacgcggttgtatcaattgatggccgagcacggcgagcagtgc
agggcgtttgggctggaatggatgaatgcccagttgcagcgtcgcagcaaacacgaccac
cggattgcgacggcgatctccatcttggatcgccacggggtggtcgccggtccgcggccg
ccgcagtgttttgaggtgtgtgctccgctaccggcgcggttccaagacgacgatcaattg
gccgaaaagaagcgacgcgatcaacagcggttgtacgcgatggttcaattcgcggccgaa
caaggtgatcgcaaacagttcttgaatcgttactttgccgatccggaggcgtccgggtga
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