Stieleria magnilauensis: TBK1r_31920
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Entry
TBK1r_31920 CDS
T10880
Symbol
rpoA_2
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smae Stieleria magnilauensis
Pathway
smae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TBK1r_31920 (rpoA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smae03021
]
TBK1r_31920 (rpoA_2)
03400 DNA repair and recombination proteins [BR:
smae03400
]
TBK1r_31920 (rpoA_2)
Enzymes [BR:
smae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TBK1r_31920 (rpoA_2)
Transcription machinery [BR:
smae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TBK1r_31920 (rpoA_2)
DNA repair and recombination proteins [BR:
smae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TBK1r_31920 (rpoA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QDV84247
LinkDB
All DBs
Position
4340773..4341762
Genome browser
AA seq
329 aa
AA seq
DB search
MHIRWRGMELPSNLEVDRDSLSQTYGKFIAEPFERGFGTSVGNSLRRVLLSSLMGSAVTQ
IKIRGAQHEFTNIPGVLEDVTEIVLNVKSLVVRNHSEATRVITIESDKAGELRAGDIETD
SDVEIINKDLVLATLTEDTPFMMEMVVENGRGYVPATEHSSADHEIGIIPVDAVYSPITR
VRYEVEETRVGQKTNYDKLILEIWTDGSVNPELALVESAKILRKHLNPFVQYRELGPSIF
SAARGGAGSPEAQLEAKLNMTLADLRLSVRANNCLESENIQTVRDLVQRNEDQLLEVRNF
GDTTLNEVREKLAQYGLHLGMRVPAQPMF
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcatatccgttggcgtggaatggaacttcccagcaatctggaagttgaccgcgattcc
ctttcccaaacgtacggcaagttcatcgccgaaccgttcgaacgtggcttcggcaccagt
gtcggaaacagcctccgacgcgtcctgctgagcagcctgatgggtagcgccgtcacgcag
atcaagattcgtggcgcccagcatgagttcaccaacatccccggcgtcttggaagacgtg
accgaaatcgtcctcaacgtcaaaagcttggtggtccgcaaccacagcgaagcgacgcgg
gtgatcacgatcgaaagcgacaaagccggtgaactgcgtgccggtgacatcgaaaccgat
tcggatgtcgaaatcatcaacaaagacctcgtgctggcgacgctcaccgaagacacgcca
ttcatgatggaaatggtcgtcgaaaacggccgcggctatgtgccggccaccgaacacagc
agcgccgatcacgaaatcgggatcattcccgtcgacgccgtctacagcccgatcacccgc
gttcgatacgaagtcgaagaaacccgcgtcgggcaaaaaaccaactacgacaagctgatc
ctggaaatctggaccgacgggagcgtcaaccccgaactggcactcgtcgaatcggcaaag
atccttcgcaaacacctcaacccgttcgtccaatatcgcgaactcggaccgagcatcttc
tcggccgctcgcggtggcgccgggtcgcccgaagctcagctggaagccaagctgaacatg
acgctcgcagacctgcgattgtccgtgcgggcgaacaactgcctggaaagtgaaaacatt
caaacggtccgtgatctcgttcaacgcaacgaagaccaactgttggaagtccggaacttc
ggtgacaccacgctgaacgaagtccgcgaaaaattagcccagtacggattgcacctcggc
atgcgagtgccggcgcaacccatgttctag
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