Stieleria magnilauensis: TBK1r_38690
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Entry
TBK1r_38690 CDS
T10880
Symbol
recQ_4
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
smae Stieleria magnilauensis
Pathway
smae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TBK1r_38690 (recQ_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smae03019
]
TBK1r_38690 (recQ_4)
03400 DNA repair and recombination proteins [BR:
smae03400
]
TBK1r_38690 (recQ_4)
Enzymes [BR:
smae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TBK1r_38690 (recQ_4)
Messenger RNA biogenesis [BR:
smae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TBK1r_38690 (recQ_4)
DNA repair and recombination proteins [BR:
smae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TBK1r_38690 (recQ_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
SKI
Motif
Other DBs
NCBI-ProteinID:
QDV84917
LinkDB
All DBs
Position
complement(5339908..5341857)
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AA seq
649 aa
AA seq
DB search
MTLAESELAAEARQILRDRFGLEEFRSGQAAVIERLLAGKNVAAVFPTGGGKSLCYQLPS
QMLSGTTVVVSPLIALMKDQCDALAARGIRAARLDSSLTEQEFRDAMRGIRDGSIRLLYV
APERFFNERFLASVGSLDVSLFAIDEAHCISQWGHNFRPDYLKLAELAGTLNADRILALT
ATATPAVLEDIRKAFAIERDDAIRTPFHRSNLHLKSTVVTAADHYETLRHRIESRPRGAT
LVYVSKQKTAEMIAEQLSDDGITATAYHAGMDAETRATIQQDFLASDDGIIVATIAFGMG
IDKANIRYVYHYSPPKSLEAYAQEIGRAGRDGGQSVCELLLLPEDRVVLENFTYGDTPSR
HSVGRMIDFCHGQPDEFFVSHYKLSFETDIRILVVRTLLTYLELDGYLQATSPRYDSYKI
HPLVTSRAILNNFDGERREFLAGLLGQLTKARKWFSLNTVTAAKALGQDRQRIVKAIDFM
AAQNWIEVNVSDLVHGYRWKRRLEHPKVIADQYFEKVVSREQSEVSRLEDVFAIASASNC
QSRRLAEHFGEAMDEACGVCSHCLGEGPHTIPPISHREIGDGVRRALAEVCRQYPDHFAT
ARQRTRFLCGLSSPQMIRSRLSRHASFGVCEQIPFADVLRQVEQISPEL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgacattggctgaatcggagttggccgcggaagcacgtcagattttgcgagaccgattc
ggactggaggagttccgcagcggtcaggcggcggtgatcgagcgtctgttggcgggaaag
aatgtcgcggcggtgtttccgaccgggggcgggaagagtctgtgttaccaattgcccagc
cagatgctcagcggcacgacggtcgtcgtttcgccgctgatcgcgttgatgaaggaccag
tgtgacgccttggccgcacgtgggatccgcgccgcccgtctggacagttccttgaccgag
caagaatttcgtgacgcgatgcggggcatccgcgacggttcgatccgcctgctgtacgtc
gccccggagcggtttttcaacgaacgatttctcgcctcggtgggctcgttggacgtctcg
ctgtttgcgatcgacgaggcgcattgcatcagtcagtgggggcacaattttcgtccggat
tacttgaagctcgctgaattggccggcacgctcaacgccgatcgcattctggcgctgacc
gcgacggcgacgccggcggtgttggaggacattcgcaaggcctttgccatcgaacgcgac
gatgcgatccgcaccccgtttcatcgttccaatctgcatttgaaaagcaccgtcgtcacc
gcggccgaccattacgaaacactccgccatcgcatcgagtcgcggccgcggggggccacg
ttggtgtatgtttccaaacagaaaacggccgagatgatcgccgagcaactcagcgacgac
ggcattaccgcgactgcttaccacgccgggatggacgccgagacgcgggccacgatccaa
caggattttctggcatcggacgacggcatcatcgtcgcgacgatcgccttcgggatgggg
atcgacaaagcaaacatccgctacgtctatcactacagtccgcccaagtcgttggaggcc
tacgcccaagagatcggacgcgccggacgtgacggtgggcagtcggtttgcgaattgttg
ttgctgcccgaagaccgtgtggtgctggagaatttcacctatggcgataccccgagtcgt
cacagcgtgggacggatgattgatttttgtcatggccaacccgacgaattttttgtctcc
cactacaagttgtcgttcgaaaccgacatccgaattcttgtcgtccgcacgttgctgacg
tacttggaattagacggttacttgcaagcgacatcgccgcgctacgattcctataagatt
catcccttggtgacctcgcgcgcgatcttgaataactttgacggcgagcgacgagagttt
ctggccggattgctcggtcaactgaccaaggcgcggaagtggttctcgctcaataccgtg
acggcggccaaggcccttgggcaagatcgccagcggatcgtcaaagccatcgacttcatg
gcggcacaaaactggatcgaagtcaacgtcagcgatttggttcacgggtaccgctggaaa
cggcggctggaacatcccaaggtcatcgctgatcagtatttcgaaaaagtggttagtcgt
gagcagtcggaggtgtcgaggctggaagacgtgttcgcgatcgcgagcgcatcgaattgc
cagtcacgtcggctggccgaacattttggcgaagcgatggatgaagcgtgcggtgtttgc
agtcattgcctcggcgaaggtccccacacgattcccccgatcagccatcgcgagatcggt
gacggcgtgcgacgcgcgctggccgaggtctgtcggcagtatccggaccatttcgcgacc
gcgcgtcaaaggacgcggtttttgtgtggactgtcttcaccgcagatgattcgctcgcgg
ctgtcccggcatgccagttttggggtctgtgaacaaatcccctttgcggatgtgcttcgc
caggtcgaacagatctcgcctgagctttaa
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