Stieleria magnilauensis: TBK1r_48140
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Entry
TBK1r_48140 CDS
T10880
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03086
RNA polymerase primary sigma factor
Organism
smae Stieleria magnilauensis
Pathway
smae02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
smae00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TBK1r_48140 (sigB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smae03021
]
TBK1r_48140 (sigB)
Transcription machinery [BR:
smae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TBK1r_48140 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_28
Sigma70_r3
Sigma70_r4_2
KORA
Motif
Other DBs
NCBI-ProteinID:
QDV85798
UniProt:
A0ABX5XUT8
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All DBs
Position
complement(6440098..6441495)
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AA seq
465 aa
AA seq
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MVSITSADTWTGQTTTSTDSYDEMADSTAIYLQQMGHTPLLSRSRELELATEIDNARTVV
RREMLRIGSVMQAVTEELIVLADGGGRADRVLDFEIRDQRAKARAVATLQSNLRTLIAIL
DSQSDDFATSTKRSTTRRRRRGTYARFLRRRERAIRLVEEVGVKFDYVERHYATLLELDR
QATRYVRQQKTSEAEIRAFSFATAHTPSRFRYRFAKIQYEYSRYVQAKKDLCEGNLRLVI
SVAKKYRGRGVALLDLIQEGNAGLMRAAEKFDHRRGFKFSTYATWWIRQAVIRAAATQSR
TVKLPPHAMAEATRVMKAIGQLRQEIGHKPSRRELCALIGLTETQFQRVEHSIGAIISLD
ASGFADQEVRPQGSRLPCTRTENPVESVELVELRYRINSLLGHLEPRERKVLKLRFGLDD
GESRSLADVARVFGISRERIRQIEQRAIYALLQNEESDVLRRYLS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtggtctcaatcacatcagcggacacgtggacaggtcagacgacgacctcgactgactct
tacgacgagatggctgactcgactgcaatctacttgcaacaaatgggtcatacaccactc
ctctctcgatctcgcgagttggaacttgctactgaaatcgacaatgcccgcacagtggtc
cgtcgcgaaatgttgcggatcggttcggtgatgcaagcagtcactgaggaactgattgtc
cttgccgatggaggtggtcgcgccgatcgagtgctcgactttgaaattcgagatcaacgt
gccaaagcacgcgccgtcgctactctccagtccaacttgcggacactgatcgccattctt
gattcccaatccgatgatttcgcgacgtcaaccaaacgatccactactcggcgaagaagg
cggggcacctatgctcgcttcctgcggcgacgtgaacgggcgatccgtttggttgaagaa
gtcggagtgaagttcgattacgttgaacgccactacgcgacgttacttgagctggatcga
caggcaacacgatacgtacgtcagcaaaaaacgtccgaagccgaaattcgagcgttcagc
ttcgcgacagcgcacacgccgtcgcgatttcgataccgattcgccaaaatccaatatgaa
tactcgcgatacgttcaggcgaaaaaggatttatgcgaaggcaaccttcgtttggtgatc
tcggtcgcaaagaagtaccgcggtcgcggcgtcgcattgctggacctgatccaagaaggt
aacgccggtctgatgagggccgccgagaaattcgatcatcgtcgtggattcaagttttcg
acctatgcgacttggtggattcgacaggcggtcattcgtgctgctgccacccaaagccgg
acggtcaaactgcctccccacgcgatggctgaggcaacaagggtcatgaaggcaattgga
caactcaggcaggagattggacacaaaccaagccgtcgtgaactctgtgcgttaattgga
ttgacggaaacccagtttcaaagggtggagcattccattggtgcgatcattagcttggac
gcgtccggatttgccgatcaagaagtcaggccacagggcagtcgcttaccctgtacgcga
actgagaatccagtcgagtcggtggaattggttgaactacgctaccgaatcaactcattg
cttgggcacctagaaccgcgagagcgcaaagtcttgaaacttcggttcgggctagacgac
ggtgaatcgcgatcacttgcggacgttgcaagggtcttcggcatctcccgcgaacgaatt
cgtcaaatcgagcagcgagcgatctacgcgctattgcaaaatgaggaatccgacgtgttg
cgacgctacttgagctga
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