Stieleria magnilauensis: TBK1r_55820
Help
Entry
TBK1r_55820 CDS
T10880
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
smae Stieleria magnilauensis
Pathway
smae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TBK1r_55820 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smae03019
]
TBK1r_55820 (rny)
Messenger RNA biogenesis [BR:
smae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TBK1r_55820 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
QDV86563
LinkDB
All DBs
Position
complement(7473023..7474630)
Genome browser
AA seq
535 aa
AA seq
DB search
MLSEAPLPHVLPLASFLDELFFLYSLAGVLAGAVLMMGYQRWKAAAYKIRLAEKADKLMD
EANREAEALKTQILLEAKEEALEIKTRGEAELAEARRLQLSREQTLDRRAEQLDNQEADL
RKQQRGLENSQQRLDAGLKSLAEQRDELKTLERKQRKVLEAVSGMTRAEAAEQLMKALDE
ELEHERGKLLLKKKKQINETIKEKSREMLLTAIQRYASAYTADSTTSTVDVPTDDMKGRI
IGREGRNIRAFEKATGIDVIIDDTPGVVIVSGFDPVRREIARRSLANLIADGRIHPSKIE
EVVEETKQQINELIIQKGREAADEVDVPGLSDRLIEMLGRLHFRTSYSQNVLRHSVEVAF
LSGMIAEMLGMRGDVARRCGLLHDIGKAADHELEGGHPKIGADLLRRHNESPEVVHAALG
HHDEIVVEHPYTMVVATADACSASRPGARRESLERYIKRMEELESIARRFEGVREAYAIS
AGRELRVIIDSTTTSDEQAAVVCHEIAKAFERELLYPGEIKVTVLRETAFTEVAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgctatccgaggctcccttgccccacgtcctgcccctcgcatcatttctcgacgaactt
ttctttctgtattcactcgccggcgttctagccggtgcagtgttgatgatggggtatcaa
cgctggaaagccgccgcctacaagattcggctggcggaaaaagctgacaagttgatggac
gaggcgaatcgcgaagccgaggcgctgaagacacagattctgctggaggccaaggaagaa
gcactggaaatcaagaccaggggagaggccgaactggccgaagctcggcgtctgcaattg
agccgagaacaaaccctcgatcgccgagccgaacagctggacaaccaggaggcggactta
cgcaagcagcaacgcgggctggaaaacagccagcaacggttggacgcgggactcaaatcg
ctcgccgaacaacgcgacgagctgaagacgctcgaacgcaagcaacgaaaggttctcgaa
gcggtctcggggatgacccgagccgaagccgccgagcaattgatgaaagcgctcgacgag
gaactggaacacgaacgcgggaagctgttgctgaagaaaaagaaacagatcaacgagacg
atcaaggaaaagagccgcgaaatgttgctgaccgcgatccagcggtacgcctcggcctac
accgccgactcgacgaccagcaccgtcgacgttccgaccgacgacatgaagggccggatc
atcggtcgcgaaggccgcaacatccgcgcgtttgaaaaagccaccggcatcgacgtgatc
atcgacgacacaccgggtgtagtgatcgtcagcgggttcgatccggtgcgccgcgaaatc
gcccgtcgctccctggccaacttgatcgccgacggtcgcatccatccgtcaaagatcgaa
gaggtcgtcgaagaaaccaaacaacagatcaacgagctgatcattcaaaagggacgtgag
gcggccgatgaagtcgacgttcccggactgagtgaccggttgatcgaaatgctgggccga
ttgcatttccgaacctcgtacagccaaaacgttttgcggcacagtgtcgaagtcgcgttc
ctgtccgggatgatcgccgaaatgctggggatgcgcggcgacgtggcccgtcgctgcggc
ttgctccacgacatcggaaaagcagccgatcacgagttggaaggcggccatccgaagatc
ggtgcggacctgctgcggcgccacaacgaaagccccgaagtcgttcatgcggcactggga
caccacgatgaaatcgtcgtcgaacatccttacacgatggtcgtcgcgaccgcggacgcc
tgcagtgccagtcgccccggtgcgcggcgcgaatcgctggaacgctacatcaaacgcatg
gaagaactcgaatcgatcgcccggcggttcgaaggggtgcgcgaagcctacgccatcagc
gccggccgcgaactgcgggtgatcatcgacagcaccacgaccagcgacgagcaagccgcc
gtcgtctgccacgagatcgccaaagccttcgaacgcgaactgttgtaccccggtgaaatc
aaagtcaccgtgctccgagaaaccgcgttcaccgaagtcgccaagtag
DBGET
integrated database retrieval system
