Stieleria magnilauensis: TBK1r_68670
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Entry
TBK1r_68670 CDS
T10880
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
smae Stieleria magnilauensis
Pathway
smae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TBK1r_68670 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smae03400
]
TBK1r_68670 (mutM)
Enzymes [BR:
smae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
TBK1r_68670 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TBK1r_68670 (mutM)
DNA repair and recombination proteins [BR:
smae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TBK1r_68670 (mutM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
DUF5817
Motif
Other DBs
NCBI-ProteinID:
QDV87835
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All DBs
Position
complement(9092209..9093108)
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AA seq
299 aa
AA seq
DB search
MPELPEVETMCRGVLPMVGHRIRAAERPPCARRPILFEPSIGRFDRRVRGRLITGIDRLG
KRVIIELEDAQAIVIEPRMTGLVLLSDPPGPEHLRLRLILDGDAIQEMLFWDRRGLGTVR
LLTADQLQRDVRDRLGPDATRISAEQLRENLRHSRRVIKVALLDQAAVAGIGNLYAAEIL
FVAGVDPRTRCDKLSRPQWERIHAGIGAVLGEAIEHEGSTLSDGTYRNALNNEGSYQNYH
RVYDRAGLGCGRCSVGVIRRIVQGQRSTFFCPICQRKTGRHGSVGEIEVSRSVADAVQS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgccggagttgcctgaagtcgaaacgatgtgtcgcggggtgctgccgatggtggggcat
cggattcgcgccgccgagcgtccgccctgcgcgcggcggccgatcttgtttgagccgtcg
atcggccggttcgatcgacgtgtccgcggccggctgatcaccggcatcgatcgtctgggc
aaacgggtgatcatcgaattggaagacgcgcaagcgatcgtgatcgaaccgcggatgaca
ggattggtgttgttgagcgatccgccggggccggagcatctgcgtttgcggctgatcctc
gatggtgacgcgattcaggagatgctgttttgggatcggcgggggctgggcaccgtgcga
ttgctgaccgcggaccaattgcagcgtgacgtccgcgatcggctcggcccggacgccacc
cggatcagcgccgaacagctgcgtgaaaatctgcgtcacagtcgccgtgtgatcaaagtc
gctctgctggaccaagcggccgtggcggggatcggaaacctgtacgcggccgagattctg
ttcgtcgccggggtcgatccacgcacccgttgtgacaagttgagccggccgcagtgggag
cgtattcacgccgggattggagcggtgttgggggaggcgatcgagcacgagggcagcacg
ctctccgacgggacgtaccgcaatgcgctgaacaacgaaggcagctatcaaaactaccat
cgcgtctacgatcgggccggtttgggatgcggacgctgctccgtcggtgtgattcgccga
atcgtccagggccaacggagtacatttttttgcccgatttgccaacggaaaaccgggcga
cacggctcggtcggcgaaatcgaagtttcgcgatcggtggcggacgcggtacaatcgtag
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