Serratia sp. FGI94: D781_0228
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Entry
D781_0228 CDS
T02433
Name
(GenBank) fatty oxidation complex, alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
smaf
Serratia sp. FGI94
Pathway
smaf00071
Fatty acid degradation
smaf00280
Valine, leucine and isoleucine degradation
smaf00310
Lysine degradation
smaf00362
Benzoate degradation
smaf00380
Tryptophan metabolism
smaf00410
beta-Alanine metabolism
smaf00640
Propanoate metabolism
smaf00650
Butanoate metabolism
smaf00907
Pinene, camphor and geraniol degradation
smaf00930
Caprolactam degradation
smaf01100
Metabolic pathways
smaf01110
Biosynthesis of secondary metabolites
smaf01120
Microbial metabolism in diverse environments
smaf01200
Carbon metabolism
smaf01212
Fatty acid metabolism
Module
smaf_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
smaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
D781_0228
00650 Butanoate metabolism
D781_0228
09103 Lipid metabolism
00071 Fatty acid degradation
D781_0228
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
D781_0228
00310 Lysine degradation
D781_0228
00380 Tryptophan metabolism
D781_0228
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
D781_0228
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
D781_0228
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
D781_0228
00930 Caprolactam degradation
D781_0228
Enzymes [BR:
smaf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
D781_0228
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
D781_0228
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
D781_0228
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
D781_0228
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AGB80615
LinkDB
All DBs
Position
complement(244321..246510)
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AA seq
729 aa
AA seq
DB search
MLYQGETLQLHELENGIAELVFDAPGSVNKLDTRTVAALGEALDVLEKHAGLKGLLLRSN
KNAFIVGADITEFLSLFAAPAEKLQHWLAYANSIFNRLEDLPVPTISAINGYALGGGCEC
VLATDFRVATPDARIGLPETKLGIMPGFGGSVRLPRLLGNDSALEIIAAGKDIGAKEALK
VGLVDAVVAPEKLADAARQMLQQAIDGQLDWRASRQPKLEPLKLSPIEAAMSFTTAKGMV
LQTAGKHYPAPMTAVKTIEAAAKLGRDEALKLETASFVPLARSNEARALVGIFLNDQFVK
GQAKKLAKDHAAPKQAAVLGAGIMGGGIAYQSALKGVPVLMKDISEKSLTLGMGEAAKLL
NKQLERGKLDGMKMAGVLATIQPTLDYAGIERAQVIVEAVVENPKVKAAVLSEVESLIGE
ETVLASNTSTIPINELAKSLQRPQNFCGMHFFNPVHRMPLVEIIRGERTSDDTIAAVVAY
ASRMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADFRQVDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPERMGKDYRDAVDVMFDNQRFGQKNQLGFYRYSQDNKGRP
RKENDEQTDTLLAEVSQPRQNISAEETIARMMIPMINEVVRCLEEGIIASPAEADMALVY
GIGFPPFHGGVFRYLDTMGTAHYVEMAQRYAHLGALYQVPAGLRAKAERNESYYPVTAPI
ADVSTGQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaacattacaactgcacgagctcgagaacggtatcgccgagctg
gtgtttgatgccccaggctcggtcaacaagctggatacccgtaccgttgccgcgctgggc
gaagcgctcgacgtcctggagaaacatgccgggctgaaagggctgctgctgcgttccaac
aaaaacgcatttatcgtcggtgccgatatcaccgaattcctgtcactgttcgccgccccg
gcggaaaaactgcagcattggctggcctacgccaattctattttcaaccgcctggaagat
ttaccggtgccgaccatttccgcgattaacggctatgcgctgggcggcggttgcgaatgc
gtgctggcgacagacttccgcgtggcaacgccggatgcgcgcatcggcctgccggaaacc
aaactcggcatcatgccgggcttcggtggctcagtacgtctgccgcgtctgctcggcaac
gacagcgcgctggaaattattgccgccggtaaagacatcggcgctaaagaggcgctgaaa
gtcggcctggtcgatgcggtcgtcgcgccggaaaaactggcggacgctgcgcggcagatg
ttgcagcaggccatcgacggacaattggactggcgcgccagccgccagccgaagctggag
ccgctgaagctcagcccgattgaagcagcgatgagctttaccaccgccaaaggcatggtg
ctgcaaaccgccggcaaacactacccggcgccgatgaccgcggtgaaaaccattgaagcc
gccgccaaactggggcgcgatgaagccctgaagctggagaccgccagctttgtgccgctg
gcgcgttccaatgaagcgcgggccttggtcggcatcttcctcaacgatcagtttgtgaaa
ggtcaggcgaaaaaactggcgaaagaccatgccgcgccgaagcaggccgcagtgctgggc
gccggtattatgggcggcggcatcgcctatcagtccgcattaaaaggcgtgccggtgctg
atgaaggatatcagtgagaaatcgctgacgctcggcatgggcgaagccgccaaactgctg
aacaaacagctggagcgcggcaagctcgacggcatgaaaatggccggcgtgctggcaacc
attcagccaacgctggactacgccgggatcgaacgcgcccaggtgatcgtcgaagcggtg
gtggagaatccgaaggtcaaagccgcggtgctgagcgaagtggaaagcctgatcggcgaa
gaaacggtgctggcctccaacacctcgaccattccgatcaatgagctggcaaaatcgctg
cagcgcccgcaaaacttttgcggtatgcacttctttaacccggtgcaccgtatgccgctg
gtagaaattatccgcggcgagcgcaccagcgacgacaccattgctgccgtagtggcctac
gcgtcacgcatggggaaaacgccgatcgtggtcaatgactgcccgggcttcttcgtcaac
cgcgtgctgttcccttactttgccggcttcagcctgctgctgcgggacggcgccgatttc
cgccaggtcgataaagtgatggaaaaacagttcggctggccaatgggtccggcttatctg
ctggacgtggtcggcatcgataccgcacatcatgcccaggcggtgatggccgccggcttc
cctgaacgcatgggcaaagattaccgtgacgcggtcgacgtgatgttcgacaaccagcgt
ttcggccagaaaaatcagctggggttctaccgctatagccaggataacaaaggcagaccg
cgtaaagagaacgatgaacaaaccgatacgctgctggcggaagtcagccagccgcggcaa
aacatcagcgccgaagaaaccatcgcgcgcatgatgattccgatgattaacgaagtggtg
cgctgtctggaggaaggcatcatcgccagcccggcggaagccgatatggcactggtttac
ggcatcggtttcccgccgttccacggcggcgtattccgctacctggataccatgggcacg
gcccattacgttgaaatggcgcagcgttacgcacatctgggcgcgctgtaccaggtcccg
gccggcctgcgcgccaaagccgaacgtaatgaaagctactacccggtgacggcgccgatc
gcggatgtctccactggccaaccggcatga
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