Serratia sp. FGI94: D781_0402
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Entry
D781_0402 CDS
T02433
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
smaf
Serratia sp. FGI94
Pathway
smaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D781_0402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smaf03019
]
D781_0402
03016 Transfer RNA biogenesis [BR:
smaf03016
]
D781_0402
Enzymes [BR:
smaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
D781_0402
Messenger RNA biogenesis [BR:
smaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D781_0402
Transfer RNA biogenesis [BR:
smaf03016
]
Prokaryotic type
tRNA degradation factors
D781_0402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
aRib
OB_RRP5_4th
S1_RRP5
KH_2
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
AGB80762
LinkDB
All DBs
Position
431500..433620
Genome browser
AA seq
706 aa
AA seq
DB search
MLTPTIRKFQYGQHTVTIETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDHFLNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYVNDQYVLNPTVDELKESRLDLVVA
GTAGAVLMVESEAEVLSEDQMLGAVVFGHEQQQVVIDNINSLVAEVGKPKWDWQPTPVNE
ALQARVAELAQSRLGDAYQITEKQDRYAQVDAIKEDVTAALLEQDETLDAADIQDALSDL
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNLDELMGEKTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAMMPKPED
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISQFAPRIHTMKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATASEEAAPAAPEAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctgacaccgactattcgcaaattccagtatggccagcataccgtcaccattgagacc
ggtatgatggcgcgtcaggcgacggccgccgtcatggtaagcatggacgacaccgccgta
ttcgttaccgtcgtgggccagaaaaaagccaaaccaggccagagcttcttcccgctgacc
gttaactatcaggagcgtacctacgccgccggtcgtatcccgggcagcttcttccgtcgt
gaaggccgtccgagcgaaggcgaaaccctgacctcccgtctgattgaccgtccaatccgc
ccactgttcccggaccacttcctgaacgaagtgcaggtgatcgcgaccgtggtttccgtt
aacccgcaggttaacccagatatcgtggcgatgatcggcgcctccgccgcgctgagcctg
tccggcattccgttcaacggcccaatcggcgcggcgcgcgtgggttatgtcaatgaccag
tacgtgctgaacccgaccgttgacgagctgaaagagagccgtctggacctggtggttgcc
ggtaccgccggcgcagtgctgatggttgagtctgaagccgaagtgctgagcgaagaccag
atgctgggcgccgtggtgttcggccacgagcagcagcaggtggttatcgacaacatcaac
tcactggttgccgaagtgggcaaacctaagtgggactggcagccgactccggttaacgaa
gcgctgcaggcgcgcgtggccgagctggcgcagagccgtctgggcgatgcttaccagatc
actgagaagcaggatcgttacgcacaggttgacgccatcaaagaagacgtcaccgccgcg
ctgctggagcaggacgagacgctggacgcagcagatatccaggacgcgctgagcgatctg
gagaaaaacgtggtgcgtagccgcgtactgcgtggcgagccgcgtatcgacggccgtgaa
aaagacatgatccgtggtctggacgtgcgcaccggcgtactgccgcgtacccacggctcc
gcgctgttcacccgtggcgaaacgcaggcgctggttaccgctaccctgggcaccgcacgc
gacgcgcagaacctggacgagctgatgggcgaaaagaccgacagcttcctgttccactac
aacttccctccgtactccgtgggcgaaaccggcatggtcggttcaccgaagcgtcgtgaa
attggtcacggtcgcctggcgaaacgtggcgtattggctatgatgcctaaaccggaagat
ttcccgtacaccgttcgcgtggtgtccgagatcactgaatccaacggttcttcttccatg
gcttccgtctgtggcgcctctctggcgctgatggacgcaggcgtgccgatcaaggcagcg
gttgcgggcatcgccatgggtctggtaaaagaagacgacaactttgtggtactgtcagac
attctgggtgacgaagaccacctgggcgacatggacttcaaagtggccggtagccgtgac
ggtatcaccgcgctgcagatggatattaaaattgaaggcatcacccgcgaaatcatgcag
gtggctctgaaccaggccaagggtgcgcgtctgcacattctgggcgtgatggaacaggcg
atcagcacgccgcgcggcgatatctctcagttcgcaccgcgtatccataccatgaagatc
aatccggacaagattaaggatgtgatcggtaaaggcggctccgtgatccgtgcgctgacc
gaagagactggcactaccattgaaatcgaagatgatggtacagtgaaaatcgcagcgacc
gacggtgagaaagcgaaatacgccattcgtcgtattgaagagatcaccgcagagatcgaa
gttggccgtatctaccagggtaaagtgacccgtatcgttgacttcggcgccttcgtggcc
atcggcggcggtaaagaaggtctggtacacatttctcagatcgctgacaagcgcgttgag
aaagtgaccgactatctgcagatgggccaggaagtgccggttaaggtgctggaagttgat
cgccagggccgtgtgcgcctgagcatcaaggaagccactgcctctgaagaggcggctcct
gctgcgcctgaagcagaataa
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