Serratia sp. FGI94: D781_0477
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Entry
D781_0477 CDS
T02433
Name
(GenBank) pyruvate-formate lyase
KO
K20038
choline trimethylamine-lyase [EC:
4.3.99.4
]
Organism
smaf
Serratia sp. FGI94
Brite
KEGG Orthology (KO) [BR:
smaf00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
D781_0477
Enzymes [BR:
smaf01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.4 choline trimethylamine-lyase
D781_0477
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Gene cluster
GFIT
Motif
Pfam:
PFL-like
Gly_radical
Motif
Other DBs
NCBI-ProteinID:
AGB80837
UniProt:
L0MC17
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All DBs
Position
complement(514014..517418)
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AA seq
1134 aa
AA seq
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MAHYALTPRVQQLAERFLSQNSTISTERASLLETLNDDVAGQPAQVRHARRFNELVKKLP
GYIGPDELIVGSQSSVPRAAIFHSESELRTPSAFTTPGQKSPDYLAVITKGLNAIGAEME
DRARSIGSAVSRGALDEANQCRAMIYACNAVIHLAQKLADKAENLAAVENHPYRQAELRE
TAAILRKVPAQGAGSFKEACQAFYLFQLALHLENGSYAVSPGGFDKLLYGFYQHDITHGV
LTPAQAYEIVECLWLKLSELSEVRAPCEQDGYPMFDAMLHGVSIDDPALVINELSAMLLA
ARRNLESINPALRIRLFGGQSVSHAQRYAAASSQPTPAAGQLMPGLTPRLQRLRDNYLDA
RPSVSIYRALAFTEVAKNNPGLPTILLRAKSFRAACESAPILIQPDELIVGHPCGKPRAG
AFSPDIAWRWVKDELDTMSTRPQDPFEIAEEDKQIIREQIVPFWEGRSLDEICEAQYREA
GVWSFSGETFVSDLSYHQINGGGDTCPGYDILLFTKGMNGIKADAQQRLNALSMENPEDI
DKIYFYKAAIETCDGVMNYAKRIADRARELASQEHDPARRAELLTIAETNDNVPANPPQT
LQEALQSIWTIESLFEVEENQTGLSLGRLDQYCYPMYQADIASGRLTQEQALELMQAFII
KCAELMWMSSEQGAKYFAGYQPFINLTVGGQKRSGGDACNELTYLIMDAVRFVKVYQPSL
ACRIHNQSPQQYMEKIVEVVKAGMGFPACHFDDSHIKMMLRKGFDFEDARDYCLMGCVEP
QKSGRIYQWTSTGYTQWPIAIEFVLNRGRMVLFDSYQGLDTGELHTLKTYEDFDRAVKEQ
VAHIVKLSAIGTVISQRVHRDVAPKPLMSLLVEGCMEKGLDVAAGGAVINHGPGLIFSGL
ATYVDSMAAIRKLVYQDRKYTLEQIRDALLANFEGYEQLRRDCLNAPKYGNDDDSVDQFA
LDITEWTERECRQYKMLYSRLSHGTLSISNNTPIGELTAATPNGRLAWMPLSDGISPTQG
ADKQGPTAIIKSVSKMNVETMNIGMVHNFKFLKGLLDTPEGKNGLITLLRTASILGNGQM
QFSYVDNEVLKKAQLEPEKYRDLIVRVAGYSAYFVELCKEVQDEIISRTVIEKF
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggcacactatgcactgacgccgcgcgtacagcagctggcggaacgctttttatctcag
aacagcaccatcagcaccgaacgcgccagcctgctggagacgctgaacgacgacgtagcc
ggccagccggctcaggttcgccatgcccggcgtttcaatgagctggtgaaaaaactgccc
ggctatatcggcccggatgagctgattgtcggcagccagtcctccgtgccgcgcgccgct
attttccacagcgaaagcgagctgcgcaccccttccgcctttaccacgccgggccagaaa
tcgcctgactatctggcggtgatcaccaaaggcctgaacgccatcggcgccgaaatggaa
gaccgcgccagaagcatcggcagcgcggtcagccgcggcgcgctggatgaggccaaccag
tgccgcgccatgatctacgcctgcaacgccgttattcatctggcgcagaagctggccgat
aaggcggagaacctggccgcggtggaaaaccatccttaccgccaggccgaactgcgcgaa
accgccgccatcctgagaaaagtgccggcgcagggcgcaggcagctttaaagaggcgtgc
caggcgttttatctgttccagctggcgctgcatctggaaaacggcagctacgcggtcagc
ccgggcggcttcgacaagctactgtacggcttctaccagcacgatattacccatggcgtt
ctgaccccggcgcaggcctatgagatcgtcgaatgcctgtggttaaaactgagcgaactg
tcagaagtgcgcgccccttgcgagcaggacggctacccgatgttcgacgccatgctgcac
ggcgtaagcattgacgacccggcgctggtgattaacgaactgtctgccatgctgctggcc
gcgcgccgcaacctggaaagcatcaacccggcgctgcgcatccggctgtttggcggccag
tccgtctcccatgcccagcgctacgccgccgccagctcgcagccgacgccggccgccggc
cagctgatgccgggcctgacgccgcgcctgcagcgcctgcgcgacaactacctggacgcc
cgtccgagcgtctccatctaccgcgctctggcctttaccgaagtagcgaagaacaacccg
ggcctgccgaccattctgctgcgcgccaagtcgttccgcgccgcctgtgaaagcgcgccg
atcctgatccaacctgacgaactgatcgtcggccacccgtgcggtaaaccgcgcgccggc
gccttctcgccggatatcgcctggcgctgggtgaaggacgagctggataccatgagcacc
cgtccgcaggatccgttcgagatcgccgaagaagacaagcagatcatccgcgaacagatc
gtgccgttctgggaaggccgctcgctggatgagatctgcgaggcgcagtaccgcgaggcc
ggcgtctggtcgttcagcggcgaaaccttcgtcagcgatctctcctaccaccagatcaac
ggcggcggcgatacctgcccgggctacgacatcctgctgttcaccaagggcatgaacggc
atcaaagccgacgcccaacagcgcctcaacgcgctgagcatggaaaacccggaagatatc
gacaagatctacttctacaaggcggcgatcgaaacctgcgacggcgtgatgaactatgcc
aaacgcatcgccgacagggcgcgcgagctggcgtcgcaggagcacgatccggcgcgccgc
gccgaattgctgaccattgcggaaaccaacgacaacgtgccggccaacccgccacagacc
ctgcaggaagcgctgcagagcatctggacgatagagtcgctgtttgaggtggaagagaac
caaaccggcctgtcgctggggcgtctcgaccagtactgctacccgatgtatcaggcggat
atcgcctccggccgtctgacgcaggagcaggcgctggagctgatgcaggcatttatcatc
aagtgcgccgagctgatgtggatgtccagcgagcagggcgccaagtacttcgccggctac
cagccgtttatcaacctgaccgtgggcggccagaagcgcagcggcggcgacgcctgtaac
gaactgacctacctgattatggatgcggtgcgctttgtcaaagtgtatcagccgtcgctg
gcctgccgtattcacaaccagtcgccgcagcagtatatggaaaaaatcgtcgaggtggtg
aaagccggcatgggcttcccggcctgtcactttgatgattcccacatcaagatgatgctg
cgcaagggattcgattttgaagacgcgcgcgactactgcctgatgggctgcgtggagccg
caaaagtcgggccgcatctaccagtggacctctaccggctacacccagtggccgatcgcc
atcgagttcgtgctcaaccgcggccgcatggtgctgttcgacagctatcagggcctggat
accggcgagctgcatacgctgaaaacctatgaagacttcgaccgcgcggtgaaggagcag
gtggcgcatatcgtcaaactctccgccatcggcaccgtaatcagccagcgcgtacaccgc
gacgtggcgccgaaaccgctgatgtcgctgctggtggaaggctgtatggagaaaggtctc
gacgtcgccgccggcggcgcggtgatcaaccatggccctggcctgatcttctcgggtctg
gcgacctatgtcgactcgatggccgccatccgcaagctggtgtatcaggaccgtaaatac
accctggagcagatccgcgatgcgctgctggccaacttcgaaggttacgaacagctgcgc
cgcgactgtctgaacgcgccgaagtacggcaacgacgacgacagcgtggatcagttcgcc
ctcgacatcaccgagtggacggagcgcgagtgccgtcagtacaagatgctctactcgcgc
ctgagccacggcaccctgtccatctccaacaacacgccgatcggcgagctgacggcggcg
acgccgaacggccgtctggcctggatgccgctgtccgacggcatcagcccgacccagggc
gcggacaagcaggggccgaccgccatcatcaagtccgtcagcaagatgaacgtggagacc
atgaacatcggcatggtgcacaacttcaagttcctcaaggggctgctggataccccggaa
ggcaagaacgggctgatcaccctgctgcgcaccgcctcgattctcggcaacggccagatg
cagttcagctatgtcgataacgaggtgctgaaaaaggctcagttggagccggagaaatac
cgcgacctgatcgtgcgcgttgcgggctacagcgcctacttcgtggagctgtgcaaagag
gttcaggacgaaatcatcagccgtacggtgattgagaagttctga
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