Serratia sp. FGI94: D781_0962
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Entry
D781_0962 CDS
T02433
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
smaf
Serratia sp. FGI94
Brite
KEGG Orthology (KO) [BR:
smaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smaf03400
]
D781_0962
DNA repair and recombination proteins [BR:
smaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D781_0962
Archaeal homologous recombinant proteins
D781_0962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
cobW
ABC_tran
AAA_15
nSTAND3
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGB81294
UniProt:
L0MBH8
LinkDB
All DBs
Position
complement(1021138..1024392)
Genome browser
AA seq
1084 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFSAEPFASNGLFAITGPTGAGKTTLLDAVCLALYHQTPR
LHVSPSQNDLMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNDPNGNLQAPKVELALLAD
GKIVADKVRDKLEAVAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGRLSERVFEQHKQAKLELDALHQRASGIELLSDEQRQQLDTQLEALRQEETTLNQRDEQ
QRQTLGWLQQWQRLHQQRQQGQQRLQVLQQEQEQAEPQLQTLARSEPAERLRPLHNERQR
CRDELQASQQQLTRLDQQLQQQTAQLAPLQQALEQARAEQQKQAEHRQQQQQLIDEQVLP
LDHQIAQLSKSRAELQQNRDEAVRQCGQQQQTLEALRAERAQLATQAEQHQTQLSALTQA
LAAQQQQQSALEAETPLAALRQRLQQLSDLRPTRQQLATLSSLAQQLDQRLTQQRQELLA
GQQQLQQLAPQLEQARQQYQQHKTLQAEVEKTLELEQRIVSLEAERARLQTGAPCPLCGS
TEHPAVTEYQTLNPSASARRLDTLRQQTETLYKSGVELRARHDGLQQQQQRQQQALEQDE
QQLAAHRQRWSTLTAELAFDFDLQESERLQQWLSDCDREEREGQQHLSRHEQAAQAVQQA
KDALSALQSAQQQAQQQTALLNERLTLLDKQYADARQQQQRLQQQWQDNEEQLVAQQRQR
QALFGEQQVAQVREQLRVRQAACELASQQAAERWQQAQEQRERLNGQLAGLQQQLAQQTQ
RAEQAQQRWQQALDASEFTDDAAFQAALLDDGQRQQLQQLKEQLQQRQVEARALLAQAEQ
ALEQHRQQRPPQADEEHADLEALAQQQQALTQQLKTLQLRQGELRNQLTSDAERRGNQQA
LFAQIAQSQRQYDDWSYLNQLIGSKEGDKFRKFAQGLTLDHLVYLANNQLSRLHGRYLLQ
RKNSDALELLVVDTWQADAQRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGISRLEPQY
RVEG
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctgagcctgcggctgaaaaacctcaactcgctgcagggcgagtggaaaata
gacttcagcgccgagccgttcgccagcaacggcctgttcgccatcaccggcccgaccggc
gccggcaaaaccaccctgctcgacgccgtctgtctggcgctgtatcaccagacaccgcga
ctgcacgtctcccccagccagaacgatctgatgacgcgccacaccgccgaatcgctggcc
gaggtggagttcgaggtcaagggcgtcggctaccgcgccttctggagccagcgtcgggcc
aaaaacgatccgaacggcaatctgcaggcgccgaaggtcgaactggcgctgctggcggac
ggcaagatcgtcgccgacaaggtgcgcgacaagctggaggcggtcgccgccatcaccggc
ctcgacttcggccgctttaccaaatcgatgatgctgtcgcaggggcagttcgccgccttc
ctcaacgccgacgccaacgaccgcgccgagctgctggaggagttaaccggcaccgaaatc
tacggccggctgtccgagcgggtgttcgaacagcataagcaggccaaactggagctggac
gcgctgcaccagcgcgccagcggcattgagctgctgagtgacgaacagcgccagcagctg
gacacgcagctcgaggcgctgcgtcaggaagagaccacgcttaatcagcgcgatgagcag
cagcggcagacgctgggctggctgcagcagtggcagcgcctgcaccagcagcgacagcaa
ggccagcagcgcttacaggtgctgcagcaggagcaggaacaggccgaaccgcagctgcag
acgctggcgcgcagcgaacccgccgagcggctgcgtccgctgcacaatgagcgccagcgc
tgccgcgatgagctgcaggcgtcgcagcagcagctgacccggctcgaccagcagctacag
caacagaccgcacagctggcgccgctgcagcaggcgctggagcaggcgcgcgccgaacag
cagaaacaggcggagcaccgccagcaacagcagcagttgatcgacgaacaggtgctgccg
ctcgatcaccagatcgcacagctgagcaaaagccgcgctgaactgcagcagaaccgcgac
gaggccgtgcgccagtgcgggcaacaacaacagacgctggaggcgctgcgcgccgaacgc
gcccagctggcgacgcaggccgaacagcatcagacgcagctgagcgccctgacccaggcg
ctcgccgcgcagcagcagcaacagagcgcgctggaggccgaaacgccgctggccgccctg
cgccagcgcctgcagcagctgagcgatctgcgcccgacgcgccaacagctggcgaccctg
tcgtcgctggcgcagcagctcgaccagcggctgacgcagcagcggcaggaactgctcgcc
ggtcagcaacaattgcaacagctggcgccgcagttagagcaggccagacagcagtatcaa
caacataaaactctgcaggcggaggtggaaaaaaccctcgagcttgagcagcgtatcgtc
agcctggaggccgaacgcgcccggctgcagaccggcgcgccctgcccgctgtgcggctcc
accgaacatccggccgtcaccgagtaccagacgctcaatccgtcggccagcgcccggcgt
cttgatacgctgcgccagcagaccgagacgctgtataaaagcggcgtcgaactgcgcgcc
cgtcacgacggcctgcagcagcaacaacagcgccagcagcaggcgctggagcaggacgag
cagcagctggcggcccatcggcagcgctggagcaccctgaccgccgaactggcgtttgat
ttcgatctgcaggagagcgaacgcctgcagcagtggctaagcgactgcgaccgcgaagag
cgggaaggccagcagcacctcagccggcatgagcaggcggcgcaggcggtacagcaggcc
aaagacgcgctgagcgcgctgcagagcgcgcagcagcaggcgcagcagcagacggcgctg
ttgaatgaacgcctgacgctgctggacaaacagtatgccgacgcccggcagcagcaacag
cgtctgcagcagcagtggcaggacaacgaggagcagcttgtcgcccaacaacggcagcgg
caggcgctgtttggcgaacagcaggtggcgcaggtgcgcgaacagctgcgcgtccggcag
gcggcctgcgaactcgccagccagcaggccgccgaacgctggcagcaggcgcaggagcag
cgcgaacgcctgaacggtcagttggcggggctgcagcaacagctggcgcagcaaacgcag
cgcgccgagcaggcgcagcagcgctggcagcaggcgctggacgccagtgaatttaccgat
gacgccgccttccaggccgccctgctggacgatgggcagcgtcagcagctacagcagttg
aaagaacagctgcagcagcgtcaggtggaagcccgcgcgttactggcgcaggccgagcag
gcgctggagcagcaccgacagcagcgcccgccgcaggcggatgaagagcacgccgacctg
gaagcgctggcgcagcagcagcaggcgctgacgcaacagctgaagacgctgcagctgcgt
cagggcgagctgcgcaaccagctcaccagcgacgccgagcgccgcggcaaccagcaggcg
ctgttcgcgcaaatcgcccaaagccagcggcagtatgacgactggagctatctcaaccaa
ctgatcggctcaaaagaaggcgacaagttccgcaagttcgcccaggggctgacgctcgat
cacctggtctatctggcgaacaaccagctcagccgcctgcatggccgctatctgctgcag
cggaaaaacagcgatgcgctggagctgctggtggtggatacctggcaggcggacgcgcag
cgcgatacccgcacgctgtccggcggcgaaagcttcctggtcagcctggcgctggcgttg
gcgctgtccgatctggtgagccataaaaccagcatcgattcgctgttcctcgacgagggc
ttcggtacgctggatgcagagacgctggacaccgcgctggacgcgctcgacagccttaac
gcctccggcaaaaccatcggcgtgatcagtcacgttgaggcgatgaaagagcgcattccg
gtgcagatcaaagtgaagaaggtcaacggcctgggcatcagccggctggagccgcagtac
cgcgtcgagggttaa
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integrated database retrieval system
