KEGG   Serratia sp. FGI94: D781_1258
Entry
D781_1258         CDS       T02433                                 
Name
(GenBank) DNA/RNA helicase, superfamily II
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
smaf  Serratia sp. FGI94
Pathway
smaf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smaf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    D781_1258
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smaf03019]
    D781_1258
Enzymes [BR:smaf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     D781_1258
Messenger RNA biogenesis [BR:smaf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     D781_1258
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UvrD-helicase
Other DBs
NCBI-ProteinID: AGB81570
UniProt: L0MFM5
LinkDB
Position
1310928..1312295
AA seq 455 aa
MSFETLGLNAEILRAVEEQGYREPTPIQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPVL
QLLSSKPSPVKGRRPVRALILTPTRELAAQIGENVSAYSQHLRLRSLVVFGGVSINPQMM
KLRGGVDILIATPGRLLDLEHQNAVDLSNVEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDDIKALAGKLLHNPASVEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GEGDWRQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGRIRVLV
ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAERTGEAISLVCIDEHKLLRDI
ERLLKREIPRIALPGYEPDPTIKAEPIINGRQQRGGRGNGNPGRGNGNGGGQRAANGGGQ
RDNRGNGAQRARPQGEGKPRSGAPARRPRRSRPAE
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgtcatttgaaactctcggcttgaatgccgaaatcctgcgtgccgttgaagaacagggc
tatcgcgaacctacgccgattcaacgtcaggcgatcccggtggtgctggaagggcgcgac
ctgatggccagcgcccagaccggcaccggcaaaaccgccggctttaccctgccggtattg
cagctgctgagcagtaaaccgagcccggtgaaaggccgccgcccggtgcgcgcgctgatc
ctgaccccaacccgtgagctggcggcgcagatcggcgagaacgtcagcgcctacagccag
cacctgcgcctgcgttcgctggtggtgttcggcggcgtcagcatcaacccgcagatgatg
aaactgcgcggcggggtggatattctgatcgccacgccgggccgtctgctggatctggaa
catcaaaacgccgtcgatctgtccaatgtggaaatcctggtgctggacgaagccgaccgc
atgctggatatgggctttatccacgatattcgtcgcgtgctggccaagctgccggcgaag
cgtcagaacctgctgttctccgccaccttctccgacgatatcaaggcgctggccggcaaa
ctgctgcacaacccggcgtcggtggaagtggcgcgccgcaataccgcctccgagcaggtg
acgcagcacgtgcactttgttgacaagaagcgtaagcgggaactgctgtcgcagatgatc
ggcgaaggcgactggcgtcaggtgctggtgtttacccgcaccaagcacggcgccaaccat
ctggccgaacagctgaataaagacggcatcaccgccgccgcgatccacggcaacaaaagc
cagggcgcgcgtacccgggcgctggccgattttaaagatggccgcatccgcgtactggtg
gcgaccgatatcgcggcgcgtggtctggatatcgaccagctgccgcacgtggtgaactat
gaactgccgaacgtgccggaagactacgtgcaccgtatcggccgtaccggccgggcggaa
cgcaccggcgaagcgatctcgctggtatgtatcgatgaacacaagctgctgcgtgatatt
gaacgcctgctgaagcgcgagattccgcgcatcgccctgccgggctatgagccggatccg
accatcaaggcggagccgatcatcaatggccgccagcagcgcggcggccgtggcaacggc
aacccggggcgcggcaacggtaacggcggtggccaacgcgcggccaacggcggcggccag
cgtgacaaccgcggcaacggcgcccagcgcgcccgtccgcagggcgaaggcaaaccgcgc
agcggcgcgccggcccgccgtccgcgtcgcagcagaccggcggagtaa

DBGET integrated database retrieval system