Serratia sp. FGI94: D781_2189
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Entry
D781_2189 CDS
T02433
Name
(GenBank) type I secretion system ABC transporter, HlyB family
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
smaf
Serratia sp. FGI94
Pathway
smaf02010
ABC transporters
smaf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
smaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D781_2189
03070 Bacterial secretion system
D781_2189
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smaf02000
]
D781_2189
02044 Secretion system [BR:
smaf02044
]
D781_2189
Transporters [BR:
smaf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
D781_2189
Secretion system [BR:
smaf02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
D781_2189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Peptidase_C39
AAA_16
AAA_29
AAA_22
AAA_30
PRK
AAA_18
DUF87
NB-ARC
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AGB82460
UniProt:
L0MIA2
LinkDB
All DBs
Position
complement(2306986..2309106)
Genome browser
AA seq
706 aa
AA seq
DB search
MANVHQDLWQGFSLIAQYWGISANIPALQQQFYADKRHDIKTQFIRAVRSSGLKCRHVKK
LNLIKNPPPLPAIINLPDKGYVVLLAIKNERLLIQSIESAEPEIIEILPEQRYSGFLFAR
RVTWESLEQEFNLQWFYRAFLRYKKLVGEVLLASFFMQILALVTPLFFQVVVDKVLAHQS
LTTLDVLAIGMFCIALFDVVLGGLRNYQLAHTSQRIDVTLSSLLYKHLLSLPLGYFKQRQ
VGVTVARVHELKTVREFLTGSALTLCLDILFTLVFFIVMAFYSVPLTLIVIVSLLPYIIL
SAIITPVLRRRLNEQFQQGAKNQAFLVESITGIEPVKAMAVENHMTRRWDEQVASFVTSC
FKTQNLGNIAGQISQLVSKVTSVAILWYGAQLVINGELTVGALIAFNMFAGQVTAPVLRL
VQLWQDFQQVSISVKRLGDILNVTPEHQQTSVNTLSEVKGAVRFANVVFTYQPSAAPVVN
GVNLAIQPGEIIGIVGRSGSGKSTLTRLIQRLYTPTGGQIFIDGIDIAQTDPLWLRKQIG
VVLQETQLFNGTIRDNIALALPEASLEQVIEAATMAGAHDFISEFALGYDTPVGEQGGQL
SGGQKQRIGIARALMAQPKILIFDEATSALDYESEQVIQQNMVKICRERTVFIIAHRLST
VRQANRIIVMEKGQIIEQGSHHQLLTKQGMYSHLHQLQSGVVANEN
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtccatcaggatttatggcaaggctttagtttaattgcacagtattggggg
atctccgccaacatccccgcgttacaacagcagttctatgccgataaacggcacgacatt
aaaactcaatttatccgagccgtacgcagcagcggcttaaaatgccgtcatgtaaaaaaa
ttaaacctgataaaaaacccaccaccattacctgccattattaatctgccggacaaaggc
tatgtggttttactggcaattaaaaacgaacgcctcctgattcaatccatcgagtccgca
gaacctgagatcatagaaatcttgcctgagcaacgctactctggttttctctttgcccgc
agagtaacttgggaatcattagagcaagaatttaacttacagtggttttaccgggcattt
ttacgctacaaaaaactggttggcgaagtgctgttggcctcattttttatgcagatcctg
gccttagtcacaccgctgttttttcaagtggtggttgataaggtattggcccaccaaagc
ttaaccacgttggatgtgttggccattggcatgttctgcatcgctttatttgatgttgta
cttggcggtttgcgtaattatcaactggcacatacctcacagcggatcgatgtgacgtta
agttcattactgtataagcacctattatcattaccgctgggctattttaaacagcgtcag
gtaggtgtcaccgtcgccagggtgcatgaactaaaaacggtgcgggaatttttaaccggc
agtgcgctcaccttatgccttgatatcctgtttacgctggttttctttatcgtgatggct
ttttatagcgtccccctgaccttgatcgtcattgtttcgttgctgccttatatcattctg
tcggccatcatcacgcctgtattacggcgaagattaaatgagcaattccaacagggcgca
aaaaatcaggcgtttttagtggagagtattaccggtattgaaccggttaaggcaatggcg
gttgaaaatcatatgacccgacgttgggatgaacaggtggcttcgtttgttaccagctgt
tttaaaacccagaatctgggcaatatcgccgggcaaatttctcagctggtcagtaaagtc
accagcgttgctattttatggtatggcgcccagttggtcatcaatggcgagctaacggtg
ggtgcattaatcgcgtttaacatgtttgctggtcaagtgactgcgccagtattgcggctg
gtacagctatggcaagattttcagcaggtctctatttcggtaaaacggctgggcgatatt
cttaacgttacgcctgaacaccaacaaaccagcgtcaacaccctgtcggaagtcaagggc
gcggtgcgctttgccaacgtcgtttttacctatcaacccagcgccgcgcctgtggtcaat
ggcgtcaatctggccatccaaccgggagaaattatcgggatagttggccgttcagggtcg
ggaaaaagcaccctgacgcgtttaattcaacgtttgtataccccgaccggcgggcaaatt
ttcatcgacggcattgacattgcccaaaccgatcctctgtggttgagaaagcagattggc
gtggtgttacaggagacccagctgtttaacggtacgatccgcgataatattgcgttagcg
ctgccggaagcctcattagaacaagtcattgaagccgccactatggcaggagcacacgat
tttatcagcgaattcgctttgggttacgataccccagtgggtgaacaaggtgggcaacta
tcgggggggcaaaaacagcgcatagggattgccagagcgctgatggctcagccgaaaata
ctgatttttgatgaagcaaccagcgcattagattatgagtctgaacaggttattcaacaa
aatatggtgaagatttgtcgggaacgcacggtttttatcatcgcccaccgtttatcaacg
gtacgtcaggctaaccgtattattgtgatggaaaaggggcagattattgagcagggttca
caccatcagttgctgaccaaacagggcatgtactcccacttacatcagttacagagcggt
gtcgttgccaatgaaaattaa
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