Serratia sp. FGI94: D781_2502
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Entry
D781_2502 CDS
T02433
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
smaf
Serratia sp. FGI94
Brite
KEGG Orthology (KO) [BR:
smaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smaf03016
]
D781_2502
Enzymes [BR:
smaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
D781_2502
Transfer RNA biogenesis [BR:
smaf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
D781_2502
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AGB82762
UniProt:
L0MHJ2
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All DBs
Position
complement(2645365..2646486)
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AA seq
373 aa
AA seq
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MNYTLITTDAGLQQVCEQARTHAQIALDTEFVRTRTYYPQLGLIQLYDGEQLSLIDPLPI
TRWQPFIDLLSDKAVVKYLHAGSEDLEVFLNAFQTLPTPLVDTQILAAFTGRPLSCGFAT
LVAAYMQVELDKSESRTDWLARPLTERQCQYAAADVFYLLPMAGQLVQEVEQAGWTEAAS
NECLLLCQRRSETLAPELAYREINNAWQLRPRQLGCLQKLAAWRLQQARQRDLAVNFVVR
EENLWAVARHMPTSMGELDALGLSGPEIRFHGKTLLALVAEANALDEAALPPPVANLVEH
PGYKKVFKEIKAAIAVVSEQSGLSSELLASRRQINQLLNWHWKLKNSDCQPELINGWRAG
LLAEPLLAILQSY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatacgttgatcactaccgatgccggattgcagcaggtctgcgaacaggccaga
acacatgctcagatcgcgcttgataccgaatttgtcagaacgcgcacctattacccgcag
cttggccttatccagttatacgatggtgaacaactctccctgattgaccccttgccgatt
acccggtggcagccgtttattgacctgttgagcgataaggcggtagtgaaatacctgcat
gccggcagtgaagatcttgaagtgttcctgaatgcgttccaaaccttgccgacgccgctg
gtggatacccagatcctggcggcgtttaccggccggccgctgtcgtgcgggtttgccacg
ctggttgccgcgtatatgcaggtggagttggacaaaagcgagtcgcgcaccgactggttg
gccaggccgctgaccgagcgccagtgccagtatgccgcggccgatgtgttttatctgctg
ccgatggccgggcaattggtgcaggaagtggagcaggccggctggaccgaagcggcgagc
aacgaatgcctgctgctgtgccagcgtcgcagcgaaacgctggcgccggagctggcctac
cgcgaaatcaataacgcctggcagctgcgtccgcgtcagctgggctgtttgcaaaagctg
gccgcatggcggctgcagcaggcgcgccagcgcgatctggcggttaatttcgtcgtgcgg
gaagagaacctgtgggcggtggcgcgtcatatgccgacctccatgggagagctggatgca
ttgggcctgagcggcccggagatccgttttcacgggaaaacgctgctggcactggttgcc
gaggccaacgcgctggatgaggctgcgctgccgcctccggtcgccaacctggtcgagcat
ccgggttacaagaaggtgtttaaggaaatcaaagcggcgattgccgttgtcagtgagcaa
agcggcttaagcagcgagctgctggcgtcgcgtcgccaaattaatcagttgttgaactgg
cattggaaactgaaaaacagcgactgccagccggaattaatcaacggctggcgtgcggga
ttattagccgaaccattattggcaatcctacagagttattaa
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