Serratia sp. FGI94: D781_2979
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Entry
D781_2979 CDS
T02433
Name
(GenBank) apurinic endonuclease APN1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
smaf
Serratia sp. FGI94
Pathway
smaf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D781_2979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smaf03400
]
D781_2979
Enzymes [BR:
smaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
D781_2979
DNA repair and recombination proteins [BR:
smaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
D781_2979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AGB83218
UniProt:
L0MH39
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All DBs
Position
3132601..3133440
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AA seq
279 aa
AA seq
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MKFVGAHVSASGGVDQAVIRAHELEATAFALFTKNQRQWKAAPLSAEVIDKFKSACARYG
YGPGQILPHDSYLINLGHPLAEALEKSRTAFLDEMQRCEQLGLTLLNFHPGSHLMQIDED
KCLARIAESINIVLDQTEGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT
CHAFAAGYDLRSEEACEHTFKQLGEVVGFNYLRGMHLNDAKSEFNSRVDRHHSLGEGNIG
KTVFSYIMRDARFDNIPLILETVNPDIWAEEIAWLKAQQ
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgtcggtgcacatgtcagcgcgtcaggcggcgtggatcaggcggttatccgc
gcacacgaactggaggcgaccgcgttcgccctgttcaccaaaaatcagcgtcaatggaaa
gctgcgccattgtctgccgaggttattgataagtttaagagcgcctgcgcgcgctatggc
tacggcccggggcagatcctgccgcacgacagctatctgattaacctggggcacccgctg
gcggaagcgctggagaagtcccgcacggcctttctcgacgaaatgcagcgctgcgaacag
ctggggctgacgctgctgaacttccaccccggcagccacctgatgcagatcgatgaagac
aagtgtctggcgcgcattgccgaatccatcaatatcgtgctggatcagaccgaaggcgta
accgcggtgattgagaacaccgccggccagggcagcaacctgggctttaagttcgagcat
ctggcggcgattatcgacggcgtggaagacaaaagccgcgtgggcgtctgtattgatacc
tgccacgccttcgccgccggctatgacctgcgcagtgaagaggcgtgcgaacacaccttt
aagcaactgggcgaggtcgtcggcttcaactacctgcgcggcatgcacctgaacgatgcc
aaaagcgaattcaacagccgcgtcgaccgccaccacagcctgggtgaaggcaatatcggc
aaaacggtgttcagctatatcatgcgcgatgcgcgcttcgataatattccgctgatcctc
gaaaccgtcaatccggatatctgggcggaagagatcgcctggctgaaggcccagcagtag
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