Serratia sp. FGI94: D781_3000
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Entry
D781_3000 CDS
T02433
Name
(GenBank) pseudouridine synthase family protein
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
smaf
Serratia sp. FGI94
Brite
KEGG Orthology (KO) [BR:
smaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smaf03009
]
D781_3000
Enzymes [BR:
smaf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
D781_3000
Ribosome biogenesis [BR:
smaf03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
D781_3000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Herpes_ORF11
Motif
Other DBs
NCBI-ProteinID:
AGB83239
UniProt:
L0MH35
LinkDB
All DBs
Position
complement(3157656..3158372)
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AA seq
238 aa
AA seq
DB search
MRLDKFLSQQLGISRALVARELRAKRVTVDGETVKSGALKLTPEMEVTFDGNVLEQINGP
RYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAYKLHAAGRLDIDTTGLVLMTDDGQWSHR
ITSPRHHCEKTYLVTLEQPLAADTAQRFAEGVQLHNEKDLTRPARLEQLEEHLVRLTISE
GRYHQVKRMFAAVGNRVVELHRERIGAITLDEDLAPGEYRPLTEEEIASVGAPHLQQD
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcgactggacaagtttttatctcagcagttaggtatcagccgcgcgctggtggcgcgt
gaactccgtgcgaagcgcgtcacggttgacggcgaaacggtaaaaagcggggcgctgaag
ctgaccccggagatggaagtcacgtttgacggcaacgtgctggaacaaatcaacgggccg
cgctacttcatgctgaacaagccgcagggctatgtgtgctccaccgacgatccggaccat
ccgacggtgctgtatttcctcgacgagccggtcgcttataagctgcatgccgccggacgc
ctggatattgataccaccgggctggtgctgatgaccgatgacggccagtggtcgcaccgc
atcacctcgccgcgccaccactgtgagaaaacctatctggtgacgctggaacagccgctg
gcggcggataccgcgcagcgcttcgcggaaggggtgcagctgcacaatgaaaaagatctg
acgcgtccggcgcggctggaacagctggaagagcatctggtgcggctgaccatcagcgag
gggcgctatcaccaggtcaagcgcatgtttgccgcggtgggcaaccgggtggtggagctg
caccgcgagcggatcggcgcgattacgctggacgaggatctggcgccgggcgaataccgt
ccgctgacggaagaagagattgccagcgtgggcgcgccacacttgcagcaagactaa
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