Serratia sp. FGI94: D781_3001
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Entry
D781_3001 CDS
T02433
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K19789
DNA repair protein RadD
Organism
smaf
Serratia sp. FGI94
Brite
KEGG Orthology (KO) [BR:
smaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smaf03400
]
D781_3001
DNA repair and recombination proteins [BR:
smaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
D781_3001
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
DUF7577
zf-tcix
AAA_16
AAA_30
Zn_ribbon_3
SLFN-g3_helicase
Zn_Ribbon_1
AAA_22
AAA
DZR
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-ProteinID:
AGB83240
UniProt:
L0MKF9
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All DBs
Position
3158630..3160387
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AA seq
585 aa
AA seq
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MAFTLRPYQLEAVDATISHFRRRPEPALIVLPTGAGKSLVIAELAKRARGRVLVLAHVKE
LVAQNHAKYCAYGLEADIFAAGLQQKQSDGKVVFGSVQSVARNLPLFDSAFSLLIIDECH
RISDNDDSQYQQIISHLQQHNPQLRLLGLTATPYRLGKGWIYQYHYHGFTRGDGSSLFRD
CIYELPLRYMIKNGYLVPPERLDMPIVQYDFSRLQAGSSGLFSEADLNRELKRQDRITPH
IISQIVEYAETRKGVMIFASTVEHAREIHGLLPPGEAALVSAETPPAERDALIEAFKQQQ
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKEDCLILDYAGNP
HDLFTPEVGVRKPHGDSQPVQVFCPGCGFANLFWGKCTAGGEIIEHYGRRCQGWLEDDDG
QREQCDYRFRFKSCPHCGAENDIAARRCHQCQAVLVDPDDMLKAALKLKDALVLRCGGME
LSSGRDDKGEWLKATYYDEDGASASERFRLQTPAQRKAFEMLFLRPHQRAPGVPFRWQQA
ADVLKQQALLRHPDFVVARKRGQFWQIREKVFDYQGRFRRADALY
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcatttaccctacgcccctatcagctggaagcggtcgacgccaccatcagccacttt
cgccggcgcccggaaccggcgctgattgttctgccgaccggcgccggcaaaagcctggtg
atcgccgagctggcgaaacgggcgcgcggccgggtgctggtgctggcgcacgtgaaagag
ctggtggcgcagaaccacgccaaatactgcgcctacgggctggaggcggatattttcgcc
gccgggctgcagcaaaagcagagtgacggcaaggtggtgttcggcagcgtgcagtccgtc
gcgcgcaacctgccgctgtttgacagcgcgttttcactgctgattatcgacgaatgccac
cgcatcagcgacaacgacgacagccagtaccagcagatcatctcgcatctgcagcagcat
aatccgcagctgcgcctgctggggctgaccgcgacgccctaccggctgggcaagggctgg
atttaccagtaccactaccacggctttacccgcggcgacggcagcagcctgttccgcgac
tgtatttacgagctgccgctgcgttacatgatcaagaacggctatctggtgccgccggag
cggctcgatatgccgattgtgcagtatgacttcagccggctgcaggcgggcagcagcgga
ctgttcagcgaggcggacctgaaccgcgaactgaagcgtcaggatcgcattacgccgcat
attatcagccagatcgtggaatatgccgaaacgcgcaagggggtgatgattttcgcctcc
accgtcgagcacgcgcgtgaaatccacggcctgctgccgccgggcgaagcggcgctggtc
agcgcggaaacgccgccggcggagcgcgacgcgctgatcgaggcgttcaaacagcagcag
ttgcgctatctggtcaacgtggcggtgctgaccaccggctttgacgcgccgcacgtggat
ttgatcgccattttgcgcccgaccgaatccgtcagcctgtaccaacagatcgtcggccgc
ggcctgcggctggcgccgggcaaggaagattgcctgatcctcgattacgccggcaacccg
cacgatctgtttaccccggaggtcggcgtacgcaagccgcacggcgacagccagccggtg
caggtcttttgccccggctgcggcttcgccaacctgttctggggtaaatgcaccgccggc
ggcgagattatcgaacactatggccgccgctgtcagggctggctggaggatgacgacggt
cagcgcgaacagtgcgactaccgcttccgctttaaaagctgcccgcactgcggcgcggaa
aatgatatcgccgcccgccgctgccatcagtgccaggcggtgctggtggatcccgacgat
atgctcaaggcggcgctcaagctgaaagacgcgctggtgctgcgctgcggcggtatggaa
ctgagcagcggccgcgacgacaagggcgaatggctgaaggccacctactacgatgaagac
ggcgccagcgccagcgagcgtttccggctgcagacgccggcgcagcgcaaagccttcgag
atgctgtttctgcggccgcaccagcgggcgcccggcgtgcccttccgctggcagcaggcg
gccgacgtgcttaagcaacaggcattgctgcgccaccccgactttgtggtggcgcgcaag
cgcggtcagttctggcagatcagggaaaaagtgtttgattatcagggccgcttccgccgc
gccgacgccctgtactga
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