Serratia sp. FGI94: D781_3403
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Entry
D781_3403 CDS
T02433
Name
(GenBank) DNA replication and repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
smaf
Serratia sp. FGI94
Pathway
smaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D781_3403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smaf03400
]
D781_3403
DNA repair and recombination proteins [BR:
smaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D781_3403
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D781_3403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AGB83623
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Position
complement(3593207..3593938)
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AA seq
243 aa
AA seq
DB search
MDGWERAFVLHGRPYSETSLMLDLFTEGHGRVRLLAKGARSRRSNLKGCLQPFTPLLVRW
GGRGEVKTLRNAEAVSLGLPLSGMMLYSGLYVNELLSRVLEQEANYSVLFFDYLQCLQTL
AASDGSPEHALRQFELALLHHLGYGVDFLHCAGSGEAVDDGMTYRYREEKGFIASLVVDH
YSFTGRELRALAERQFPDADTLRAAKRFTRIALKPYLGGKPLKSRELFRQFVRKQPHTPV
DDA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggacggctgggagcgcgctttcgtcctgcatgggcgaccgtacagtgaaaccagcctg
atgctggatctgtttaccgaaggtcacgggcgggtgcggttgctggccaaaggcgcgcgc
agccgccgttccaacctgaagggctgtctgcagccctttactcctctgctggtccgctgg
ggcgggcgtggcgaagtcaaaacgctgcgcaacgccgaagcggtctctctcggtttacct
ctcagcggcatgatgctgtacagcggcctgtacgttaacgagctgctgtcgcgcgtgctg
gagcaggaagccaactattcggtgctgttctttgattatctgcagtgtctgcagacgctg
gcggcgtcggacggttcgccggaacatgcgctgcggcagtttgagctggcgctgctgcat
catctgggttacggggtggattttctgcactgcgccggcagcggcgaagcggtcgacgac
ggcatgacctaccgctatcgtgaagaaaaaggctttatcgccagcctggtggtggaccac
tacagctttaccggccgcgagctgcgcgcgttggccgagcgtcagttcccggatgccgac
accctgcgcgccgccaaacggtttacccgcattgcgctgaaaccctaccttggcggcaag
ccgctgaaaagccgcgagctgtttcgtcagttcgtccgtaagcaaccgcatacgccggtt
gacgacgcctga
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