Serratia sp. FGI94: D781_3416
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Entry
D781_3416 CDS
T02433
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
smaf
Serratia sp. FGI94
Brite
KEGG Orthology (KO) [BR:
smaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smaf03009
]
D781_3416
Enzymes [BR:
smaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D781_3416
Ribosome biogenesis [BR:
smaf03009
]
Prokaryotic type
rRNA helicases
D781_3416
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_11
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AGB83635
UniProt:
L0MLK4
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All DBs
Position
3605292..3606620
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AA seq
442 aa
AA seq
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MTATNFSELDLDERLINALRDKGYDRPTAIQAEAIPPAMDGRDVLGSAPTGTGKTAAFLL
PVLQHLLDFPRKKSGPPRVLILTPTRELAMQVADQARELAAHTSLDIATITGGVAYMNHA
EVFSENQDLVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETISAETRW
RNQTLLFSATLEGEAIREFAERILNEPVEVEADPSRRERKKILQWYYRADDVQHKTALLI
HLLQQPDVQKSVIFVRKRERVHELATWLREAGINTCYLEGEMVQAKRNEAVKRMMDGRVN
VLIATDVAARGLDILDITHVFNFDMPRTADTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
GKVGRYLNEPLKARVIDELRPKTRVPSEKSNGKPSKKVLAKRAADKNKAKSKEKAKVKVR
HREAKNVGKRRQPKGTPAADGE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaaccaatttttccgaactcgatctcgatgaacgcctgatcaacgccctgcgt
gataaaggctacgaccgcccgaccgctattcaggccgaagccatcccaccggcgatggac
gggcgcgacgtcttgggttcggcgccgaccggtaccggtaagaccgccgccttcctgctg
cccgtgctgcagcatctgttggacttccctcgcaagaagtccggcccgccgcgcgtgtta
atcctgaccccgacgcgcgaactggcgatgcaggtcgccgatcaggcgcgtgagctggcg
gcccatacctcactggatatcgccaccattaccggcggcgtggcctatatgaaccacgcg
gaagtcttcagcgaaaaccaggatctggtggtcgccaccaccggccgcctgctgcagtat
attaaagaagagaacttcgactgccgcgcggtggaaacgctgatcctggatgaagccgac
cgcatgctggacatgggcttcgcccaggatattgaaaccatctccgccgaaacgcgctgg
cgcaaccagaccctgctgttctccgccacgctggaaggcgaagccatccgcgaattcgca
gagcgcattctgaacgagccggtggaagtcgaagccgacccttcccgccgcgagcgtaaa
aaaattctgcagtggtactaccgcgctgacgacgtgcagcataaaaccgccctgctgatc
catctgctgcagcagccggatgtgcagaagtcggtcattttcgtgcgcaagcgcgagcgc
gtgcatgagctggccacctggctgcgggaagcgggcatcaacacctgctatctggaaggc
gaaatggtgcaggccaagcgtaacgaagcggtgaaacgcatgatggacggccgcgtcaac
gtgctgatcgccaccgacgtcgccgcccgcggtctggacattctggacatcacccacgtg
ttcaactttgatatgccgcgcaccgccgatacctatctgcaccgtatcggccgcaccggc
cgcgccggccgtaaaggtaccgcaatttctctggttgaggcccacgaccacctgctgctg
ggcaaggtcggccgctatctgaatgaaccgctgaaggcgcgggtgattgacgagctgcgg
ccgaaaacccgcgtgccaagcgaaaagagcaacggcaagccgtccaagaaagtgctggcc
aagcgtgcggctgataagaacaaagccaaaagcaaagagaaagccaaggtgaaagttcgc
caccgcgaggcgaaaaacgtcggtaaacgccgccagccgaaaggcactccggcagccgac
ggcgaataa
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