Sphingopyxis macrogoltabida EY-1: AN936_01145
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Entry
AN936_01145 CDS
T04104
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
smag
Sphingopyxis macrogoltabida EY-1
Brite
KEGG Orthology (KO) [BR:
smag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smag03032
]
AN936_01145
03400 DNA repair and recombination proteins [BR:
smag03400
]
AN936_01145
Enzymes [BR:
smag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AN936_01145
DNA replication proteins [BR:
smag03032
]
Prokaryotic type
DNA Topoisomerases
AN936_01145
DNA repair and recombination proteins [BR:
smag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AN936_01145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ALH79027
UniProt:
A0A0N7GRW2
LinkDB
All DBs
Position
complement(230739..231773)
Genome browser
AA seq
344 aa
AA seq
DB search
MRPGRYSAMSAVRLIHVDDSLPGIGRERAGDGWRYRDAKGRLIRDRHEIARLNAIALPPA
YEDAWFCPAPNGHILATGYDARGRKQYRYHPEFRLAREADKYDRCAAFGHALPLLRARLA
DDLARRTLCQGRVVGAVVRLLDLAALRVGNEEYVTANKSFGATTLRQHHASLTGRTLRLN
YRAKGGTERVVTISDRSLITLVRRLQDLPGQKLFQYDDEGEFCAVGSDDVNAYIRDAMGE
EFSAKHFRTWSASVAAFAFLYDANEPPTLKMLLAHVSDWLGNTPAIARKAYIHPAMIAAA
QERGDFAAVTGPLPRATKYLSRYERGFLTYLERAPNAAALLRSA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
ttgcggccggggcgctatagcgccatgtccgccgtccgcctgatccatgtcgacgacagc
ctgcccggcatcggccgcgaacgtgccggcgatggctggcgctatcgcgacgcgaagggc
aggctcatccgcgaccggcacgagatcgcgcggctgaacgcgatcgccctgccccccgcc
tatgaagatgcgtggttctgcccagcaccgaacggccatatcctcgcgaccggttacgac
gcgcgcgggcgcaagcaatatcgctatcatcccgaattccggctggcgcgcgaagccgat
aaatatgaccgctgcgccgccttcggccatgcgcttccgctgctgcgcgcgcgcctcgcc
gacgacctcgcgcgtcgcaccctgtgccagggacgcgttgtcggtgctgtcgtgcgactg
ctcgatctggccgccttgcgcgtcggcaacgaggaatatgtcaccgcgaacaagagcttc
ggcgcgacgacattgcgccagcaccacgccagcctgaccggccgcacgctccgcctcaat
taccgcgccaagggcggcaccgagcgggtggtgacgatcagcgaccgcagcctgattacg
ttggtgcgccgccttcaggacctgcccggtcagaagctgttccaatatgacgacgagggc
gagttttgcgcggtcggctccgacgacgtcaacgcctatatccgcgatgcgatgggggaa
gagttcagcgccaagcatttccgcacctggtcggcgagcgtcgcagcctttgccttcctg
tacgacgccaatgaaccgccaacgctcaagatgctacttgcgcatgtgtcggactggctc
ggcaatacccccgcgatcgcgcgcaaggcctatatccacccggcgatgatcgccgcggcg
caggaacgcggcgatttcgcagccgtcaccggaccgctgccgcgcgcgaccaaatatctt
tcgcgttacgagcgcggatttttgacctatctcgaacgcgcgcccaatgccgcggcgcta
ctgcgttccgcctga
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