Sphingopyxis macrogoltabida EY-1: AN936_03485
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Entry
AN936_03485 CDS
T04104
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
smag
Sphingopyxis macrogoltabida EY-1
Pathway
smag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AN936_03485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smag03400
]
AN936_03485
Enzymes [BR:
smag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AN936_03485
DNA repair and recombination proteins [BR:
smag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AN936_03485
RecFOR pathway proteins
AN936_03485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_16
AAA_22
Sigma54_activat
AAA_14
AAA_17
Rad17
AAA_2
AAA_18
nSTAND3
MCM
TsaE
RNA_helicase
AAA_33
NTPase_1
Bac_DnaA
AAA_28
AAA_24
NB-ARC
NACHT
Sigma54_activ_2
IstB_IS21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ALH79461
UniProt:
A0A0N9U879
LinkDB
All DBs
Position
complement(728436..729464)
Genome browser
AA seq
342 aa
AA seq
DB search
MTEPALTTPIRTPEDADAALRPKSLAEFVGQAAARENLRIFVEAAKARGDALDHVLFFGP
PGLGKTTLAQIVAKELGVGFRSTSGPVIAKAGDLAALLTNLEDGDVLFIDEIHRLSPAVE
EILYPAMEDRALDIMIGEGPSARSVRIDLPKFTLVGATTRQGLLTTPLRDRFGIPVRLNF
YTHAELEQVITRAARLLALPIASDGALEIAKRSRGTPRIAGRLLRRVRDFATVAGHAVVD
AKAADAALNRLEVDALGLDAMDRRYLTMIADIYRGGPVGVETLAAGLSEPRDTIEDVVEP
YLLQIGLIARTARGRMLNASAWKHLGLNPPAGSQDGLFDQQK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcccgcccttaccacccccattcgcacccccgaggatgccgatgccgcgctg
cggccgaagtcgctcgccgaattcgtcggccaggcggcggcgcgcgagaatttgcgtatc
ttcgtcgaagccgcgaaggcacgcggcgacgcgctcgaccatgtgctgttcttcggaccg
cccgggctcggcaagacgaccctcgcgcagatcgtcgcgaaggagctcggcgtcgggttc
cgctcgaccagcggcccggtgatcgccaaggccggcgacctcgccgcgctgctcaccaat
ctcgaggacggcgacgtcctgttcatcgacgaaatccaccggctctcgcccgcggtcgag
gaaatcctctacccggcgatggaggatcgcgcgctcgacattatgatcggcgaaggaccg
tcggcgcgcagcgtccgcatcgacctgcccaaattcaccctcgtcggcgcgacgacgcgg
cagggcctgctgacgacgccgctgcgcgaccgtttcggcattccggtacggctcaatttc
tacacccatgccgaactcgaacaggtgatcacgcgcgccgcgcggctgctcgcgctgccg
atcgcatccgacggcgcgctcgaaatcgcgaagcgctcgcgggggacgccgcgcatcgcc
gggcggctgctccgccgcgtgcgcgatttcgcgaccgtcgcggggcacgcagtggttgat
gcgaaggcggccgatgcggcgctcaaccggctggaggtcgacgcgctcgggctcgatgcg
atggaccggcgctatctgacgatgatcgccgatatctatcgcggcgggccggtcggggtc
gaaaccctcgcggccggattgtcagagccgcgcgacacgatcgaggatgtcgtcgaaccc
tatctgttgcaaatcgggctgatcgcgcgcaccgcgcgcggccgcatgctcaacgccagc
gcatggaagcatctggggctcaatccgcccgccggatcgcaggatggactattcgatcag
caaaaatag
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