Sphingopyxis macrogoltabida EY-1: AN936_05385
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Entry
AN936_05385 CDS
T04104
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
smag
Sphingopyxis macrogoltabida EY-1
Pathway
smag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AN936_05385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smag03400
]
AN936_05385
Enzymes [BR:
smag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AN936_05385
DNA repair and recombination proteins [BR:
smag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AN936_05385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
RuBisCO_small
DUF2517
Motif
Other DBs
NCBI-ProteinID:
ALH79814
UniProt:
A0A0N9UUY6
LinkDB
All DBs
Position
complement(1161561..1162367)
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AA seq
268 aa
AA seq
DB search
MKIATFNVNGIGGRLPILLKWLALAEPDIVVLQELKAPQEAFPHAAIAEAGYQAIWHGQR
RWNGVALLSRVGEIHETRRGLPGDPGDEQSRYIEAAVGGVLIAGLYLPNGNPRPGPKFDY
KLAWMERLDAHLATLVDLKAPVVVVGDFNVIPTDEDVYKPERWKDDALFAPEAKAAFKRL
LDQGWTDAVRHLHPDETLYTFWPYWRNAFARNAGIRIDHLLLNPLAKALLKAAAVDLRPR
RWEKTSDHTPVWIELAEPAKRKRAKRVA
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatcgcgaccttcaatgtgaacgggatcggcggccgcttgcccatcctcctcaaa
tggctcgccctcgccgagcccgacatcgtcgtactgcaggaactcaaggcgccgcaggaa
gcctttccgcacgcggccatcgcggaggcggggtaccaggcgatctggcatggccagcgt
cgctggaacggggttgcgctcctcagccgcgtcggcgaaatccacgagacccgccgcggc
ctgcccggcgatccaggggacgagcaaagccgttatatcgaggcagcggtcggcggcgtg
ctgatcgcgggcctctatctccccaacggcaacccccgtcccggccccaagttcgactac
aagctcgcctggatggaacgcctcgacgcgcacctcgccacgctcgtcgacctcaaggcg
ccggtcgtcgtcgtcggcgacttcaacgtcatcccgaccgacgaagatgtctacaagccc
gagcgctggaaggacgacgccctcttcgcgcccgaagcgaaggccgcattcaagcgcctg
ctcgatcagggctggaccgatgcggtccgccatcttcacccggatgagaccctctatacg
ttctggccttattggcggaacgccttcgcgcgcaacgccggaatccgcatcgatcacctg
ctgctcaaccctctcgccaaggctttgctcaaggccgccgcagtcgatcttcgcccgcgc
aggtgggagaaaaccagcgatcacacgcccgtctggatcgagcttgccgagccggcgaaa
cgcaaacgcgcaaagcgcgtcgcgtga
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