Sphingopyxis macrogoltabida EY-1: AN936_07755
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Entry
AN936_07755 CDS
T04104
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
smag
Sphingopyxis macrogoltabida EY-1
Brite
KEGG Orthology (KO) [BR:
smag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smag03032
]
AN936_07755
03400 DNA repair and recombination proteins [BR:
smag03400
]
AN936_07755
Enzymes [BR:
smag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AN936_07755
DNA replication proteins [BR:
smag03032
]
Prokaryotic type
DNA Topoisomerases
AN936_07755
DNA repair and recombination proteins [BR:
smag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AN936_07755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
DUF7343
Motif
Other DBs
NCBI-ProteinID:
ALH80267
UniProt:
A0A0N7GSB7
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All DBs
Position
1640182..1642734
Genome browser
AA seq
850 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGRDFKVLASYGHVRDLPPKDGSVDPDDGFAMQWQLYPDKAK
RLKEIQDAAKGADRLILATDPDREGEAISWHVQELLRAKKALPQAVDRVTFNAITKQAVT
DAMAHPRALDDDLIDAYRARRALDYLVGFTLSPVLWRKLPGAKSAGRVQSVTLRMVVERE
REIEAFVAQQYWSVTGLFEMGGTPFRARLARWRGDKIERLTIGTEADARAAEADVKDGHF
TVDAVETKPLTRNPPPPFTTSTLQQEAARKLGFSASHTMRIAQALYEDGAITYMRTDGVQ
MDGSAISAARKAIADRYDGGYVPDQPRQYQTKAKNAQEAHEAIRPTDFSKDKAGSGDHAR
LYELIWKRALASQMASARLERTSIDLSDGTGKTMLRATGQVVKFPGFLALYDEGRDDSGD
DEDARLLPAMSKGDAPAKTGVEVESHETQPPPRYSEASLVKKMEELGIGRPSTYASIVQV
LKDRGYVTVEKNRFIPEESGRLLTAFLERFFERYVEYDYTAGLEEELDDVSGGRAQWQAV
LDRFWRDFKPRTGEVMEQKPSEITAALDEFLGPYLFPDKGDGTDPRLCPNCGTGRLALRG
GKFGPFIACSNYPDCKFTRKFAQPGGSDAGDTGPETMGTDPDSGLEVTKRSGRFGPYIQL
GDGKEAKRSSIPKDIPAEDFDLDYALRLLSLPREVGVHPESGKPIMAGLGRYGPYLLHDG
KYAKLTGTAEIFDIGMNAAVVRIAEAASGGGRGRTKAEPLNTFGPHPTSGGEMKLMEGRF
GPYVTDGTTNATLPKTADPATLTLEEAIALIDARAAKGPAKGKKKAAPKKKAAAKKPAAK
KAPAKKAAAE
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgcaattggtgattgtggaatcgcccgccaaggcgaagacgatcgagaaatatcttggt
cgcgatttcaaggtgctggcgagttacggccatgttcgcgacctgccgccgaaggacggc
tcggtcgatcccgacgacggctttgcgatgcagtggcagctttatcccgacaaggcgaag
cggctgaaggaaatccaggacgccgcgaagggcgccgaccgcctgatcctcgcgaccgac
cctgatcgcgagggcgaggcaatcagctggcatgtccaggagttgctgcgcgccaagaag
gcgctgccgcaggcggtcgaccgcgtgaccttcaacgcgatcaccaagcaggcggtgacc
gacgcgatggcgcacccgcgcgcgctcgatgacgatctgatcgacgcctatcgcgcccgc
cgcgcgctcgattatctcgtcggcttcactctgtcgccggtgttgtggcgcaagctgccc
ggcgcgaaatcggcgggccgcgtccagtcggtcacgctgcgcatggtcgtcgagcgcgag
cgcgagatcgaggcgttcgtcgcgcagcaatattggtcggtcaccggcctgttcgaaatg
ggcggcacgccgttccgggcgcggctcgcacgctggcgcggcgataagatcgagcgactg
acgatcggcaccgaggccgacgcccgtgccgccgaagccgatgtgaaggatggccatttc
accgtcgatgcggtcgagaccaagccgctgacgcgcaacccgccgccgcccttcaccacc
tcgacgctgcagcaggaggcagcgcgcaagctcggcttctcggcgagccacacgatgcgg
atcgcacaggcgctctacgaggacggcgcgatcacctatatgcggaccgacggcgtccag
atggacggcagcgcgatcagcgcggcgcgcaaggcgattgccgaccgctatgacggcggc
tatgtccccgaccagccgcgccagtatcagaccaaggcgaaaaatgcgcaggaagcgcac
gaagcgatccgcccgaccgacttttcgaaggacaaggccggcagcggcgaccatgcacgc
ctctatgagctgatctggaagcgtgcgctggcgagccagatggcgtcggcgcggctcgaa
cgcaccagcatcgatctcagcgacggcaccggcaagacgatgctgcgcgcgacggggcag
gtagtgaaattccccggctttcttgctctctatgacgaaggccgcgatgacagcggtgac
gacgaggatgcgcgcctgctgcccgcgatgagcaagggcgacgcgccggccaagaccggc
gtcgaggtcgaaagccacgagacacagccgccgccgcgctattcggaggcgagccttgtc
aagaagatggaggagctcggcatcgggcgcccgtcgacctatgcctcgattgtccaagtg
ctgaaggaccgcggctatgtgacggtcgagaaaaaccgcttcattcccgaagaaagcggg
cggctgctgactgccttcctcgaacgcttcttcgaacgctatgtcgaatatgactatacc
gccgggctcgaggaagagctcgacgacgtgtccggcggccgcgcgcagtggcaggcggtg
ctcgaccgcttctggcgcgatttcaagccgcgtaccggcgaagtgatggagcagaagccg
tcggagatcaccgcggcgctcgacgaattcctcggtccctatctcttccccgacaagggc
gacggcaccgacccgcgcctctgccccaattgcggcaccgggcggctcgcgctgcgcggc
ggcaagtttgggccgttcatcgcgtgcagcaactatcccgactgcaagttcacgcgcaaa
ttcgcgcagccgggaggcagcgacgcgggcgacacgggtccggagacgatggggaccgat
cccgacagcgggctggaagtgacgaagcgcagcgggcgtttcggaccctatatccagctc
ggcgacggcaaggaggcaaagcgctcgtcgatccccaaggacataccggccgaagatttt
gacctcgactatgcactgcgactgctcagcctgccgcgcgaggtcggggttcatcccgaa
agcggcaagccgatcatggcggggctcgggcgctatggcccctatctgctccacgacggt
aaatatgcgaagctgaccggtacggccgaaatcttcgacatcggcatgaacgctgcggtc
gtccggatcgccgaggcggcgagcggcggcgggcgcgggcggaccaaggccgaaccgctc
aacactttcggaccgcacccgacgagcggcggcgagatgaagctgatggaagggcgcttc
ggcccctatgtcaccgacggcacgaccaacgcgactttgcccaagacggccgatcccgcg
acgctgacgctcgaagaggcgatcgcgctgatcgatgcgcgcgcggccaaagggccggca
aagggcaagaaaaaggccgcgccgaagaaaaaggcggctgcgaagaagcctgctgcaaag
aaggctccggccaagaaggcggccgccgaatag
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