Sphingopyxis macrogoltabida EY-1: AN936_08480
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Entry
AN936_08480 CDS
T04104
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
smag
Sphingopyxis macrogoltabida EY-1
Pathway
smag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AN936_08480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smag03019
]
AN936_08480
Messenger RNA biogenesis [BR:
smag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AN936_08480
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
ALH80401
UniProt:
A0A0N9V820
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All DBs
Position
complement(1789874..1790350)
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AA seq
158 aa
AA seq
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MIDHNALPYRPCAGVMLANRDGRIFVGQRLDTTSEAWQMPQGGIDDGESPEEAAIRELGE
ETGVHGGLVEIIARSREEYFYDLPDHLIGKMWGGKYRGQRQHWFLMRFMGADSDVDIHTK
HQEFRAWKWAELNEIEKLIVPFKRVLYRGLVEEFGPLV
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaccacaacgccctgccctatcgtccctgcgccggagtcatgctcgcgaaccgc
gacgggcgcatctttgtcgggcaacgcctcgatacgaccagcgaggcctggcagatgccg
cagggcgggatcgacgacggcgagagtcccgaagaagcggcgatccgcgaactcggcgag
gaaaccggcgtgcacggcgggctggtcgagatcatcgcgcgcagccgcgaggaatatttt
tacgacctgcccgaccatctgatcggcaagatgtggggcggaaaatatcgcggccagcgc
cagcactggttcctcatgcgcttcatgggcgcggacagcgacgtcgatattcacacgaaa
catcaggaattccgtgcctggaaatgggccgaactgaatgagatcgaaaaactgatcgtg
ccgttcaagcgcgtgctttatcgcgggctggtcgaggagttcggcccgctcgtctga
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