Sphingopyxis macrogoltabida EY-1: AN936_08715
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Entry
AN936_08715 CDS
T04104
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smag
Sphingopyxis macrogoltabida EY-1
Pathway
smag03420
Nucleotide excision repair
smag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AN936_08715
03430 Mismatch repair
AN936_08715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smag03400
]
AN936_08715
Enzymes [BR:
smag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AN936_08715
DNA repair and recombination proteins [BR:
smag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AN936_08715
MMR (mismatch excision repair)
Other MMR factors
AN936_08715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ALH80446
UniProt:
A0A0N9UY47
LinkDB
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Position
complement(1839585..1841891)
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AA seq
768 aa
AA seq
DB search
MPPASIPDLPPPDPSDPPYLHGLNGPQRQAVLTTEGPVLMLAGAGTGKTAALTARLAHII
ATRRAWPSEILAVTFTNKAAREMRERIGRMIGDAVEGMPWLGTFHSIAAKMLRRHAELVG
LQSNFTILDTDDQLRVLKQLIQAEGLDEKRWPARQLAGLIDKWKNRGLTPPDLDAADKEA
YADGKGQHFYALYQARLKTLNACDFGDLLLHMLVILKNHRDVLEQYQERFKYILVDEYQD
TNASQYLWLRLLAQARKNICCVGDDDQSIYSWRGAEVANILRFEKDFPGATVIRLEQNYR
STPQILAAASALIAQNSGRLGKTLWTELDPGDKLRVVGVWDGPEEARRIGEELETLQHRK
VSLDRTAILVRAQFQTREFEDRFIAIGMPYRIVGGFRFYERAEIRDALAYLRLVQSAADD
LAFERIVNVPKRGLGDKALARIHQYARHERAPLFHAASRITETDELTPQARRQLANFVAQ
MRNWQGKANELSHPELTQLILDESGYTAMLQADRSVEAAGRLENLSELVRAMEEYESLEA
FLEHVSLVMDRDQNDDTETVTIMTIHAAKGLEFDHVFLAGWEDGVFPSQRSMDEGGTASL
EEERRLAYVAITRARRRASIYHAANRRIYGQWMSSIPSRFIGEIPQEHIESENSFGGGQS
LWRANWSAQGDPFAHVAERQPARTMTRGPAWQRAVAQSSTITRAPAPSEKGPAASVGAKP
RSDLAIGMRVFHEKFGYGEIIDIDGNKLEVEFEQAGSKRVLDGFVKLA
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgccccctgcctcgatacccgacctgccgccgcccgacccgtcggacccgccctatctg
cacgggctgaatgggccgcagcgacaggctgtgctgacgaccgagggcccggtgctgatg
ctcgcgggggccgggaccggcaagaccgcagcgctgaccgcgcggctggcgcatatcatc
gcaacgcgccgcgcctggccatcggagatcctcgcggtcaccttcaccaacaaggcggcg
cgcgagatgcgcgaacgaatcgggcggatgatcggcgacgcggtcgaaggcatgccttgg
ctcggtaccttccacagcatcgcggcgaagatgctgcgccgccacgccgaactcgtcggg
ctgcagagcaatttcaccatcctcgacaccgacgaccagctgcgcgtcctcaagcaactc
atccaggccgaggggctggacgagaagcgctggccggcgcgccagctcgcggggttgatc
gacaaatggaagaaccgcggcctgaccccgcccgatctcgatgcggccgacaaggaagcc
tatgctgacggcaaagggcagcatttctacgcgctctatcaggcgcggctgaaaaccctc
aacgcctgcgatttcggcgacctgctgcttcacatgctggtgatcctgaaaaaccaccgc
gacgtgctcgaacaatatcaggaacgattcaaatatatccttgtcgacgaatatcaggac
accaacgccagccagtatctctggctccgcctgctcgcgcaggcgcgcaaaaatatctgc
tgcgtcggcgacgacgaccagtcgatctattcgtggcgcggcgcggaggtcgcgaatatc
ctgcgtttcgaaaaggatttccccggcgcgacggtgatccgcctcgaacaaaattatcgc
tcgacgccgcagatccttgccgccgcttcggcgctgatcgcgcagaacagcggccgcctg
ggcaagacgttgtggaccgagctcgatcccggcgacaagctgcgcgtcgtcggcgtctgg
gacgggcccgaggaagcccggcggatcggtgaggaactggagacgctccagcaccgcaag
gtcagcctcgaccgcaccgcaattctcgtccgcgcgcagttccagacgcgcgagttcgaa
gaccgcttcatcgcgatcggcatgccgtaccgcatcgtcggcggtttccgcttctacgaa
cgcgccgaaatccgcgatgcgctcgcctatctccgtctcgtccagtcggcagccgacgac
ctcgcgttcgagcgcatcgtcaacgttcccaagcgcgggctcggcgacaaggcgctggcg
cgtatccaccaatatgcgcggcatgagcgcgcgccgctcttccacgccgcgtcgcggatc
accgaaaccgacgaactgacgccgcaggcgcgccgccagctggcgaatttcgtcgcgcag
atgcggaactggcagggcaaggcgaacgagctgtcgcatcccgaactcacccagctgatc
ctcgacgaatcgggctataccgcgatgctgcaggccgaccgcagcgtcgaggctgcgggt
cgccttgaaaacctctccgagctcgtccgcgcgatggaggagtatgaatcgctcgaagcc
ttcctcgagcatgtcagcctggtgatggaccgcgaccagaatgacgacacagagaccgtc
accatcatgacgatccacgccgccaaggggcttgagttcgatcatgtcttccttgccggc
tgggaggatggcgtcttcccgtcgcagcgctcgatggatgaaggcggcaccgccagcctg
gaggaagagcgccgcctcgcctatgtcgcgatcacccgcgcccgccggcgcgcgagcatc
tatcatgccgcgaaccggcgtatctatggccagtggatgagcagcatccccagccgcttc
atcggcgaaatcccgcaagagcatatcgagagcgagaacagctttggcggcgggcaaagc
ctgtggcgtgctaactggtcggcgcagggcgaccccttcgcgcatgtcgccgaacgccag
ccggcgcggacgatgacgcgcggtccggcttggcagcgcgcggtcgcgcaatcctcgacg
atcacgcgcgcgccggcgcccagcgaaaaaggcccggccgcctcggtcggcgccaagccg
cgcagcgatctcgcgatcggaatgcgcgtgttccacgaaaaattcgggtacggcgagatc
atcgacatcgacggcaacaagctggaggtcgagttcgagcaggccggcagcaagcgggtg
cttgacggctttgtgaagctcgcctga
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