Sphingopyxis macrogoltabida EY-1: AN936_08950
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Entry
AN936_08950 CDS
T04104
Name
(GenBank) DNA-directed DNA polymerase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
smag
Sphingopyxis macrogoltabida EY-1
Pathway
smag03030
DNA replication
smag03430
Mismatch repair
smag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AN936_08950
03430 Mismatch repair
AN936_08950
03440 Homologous recombination
AN936_08950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smag03032
]
AN936_08950
03400 DNA repair and recombination proteins [BR:
smag03400
]
AN936_08950
Enzymes [BR:
smag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AN936_08950
DNA replication proteins [BR:
smag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AN936_08950
DNA repair and recombination proteins [BR:
smag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AN936_08950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
AAA_19
Mg_chelatase
NACHT
AAA_5
APP1_cat
Motif
Other DBs
NCBI-ProteinID:
ALH80492
UniProt:
A0A0N9UY84
LinkDB
All DBs
Position
complement(1883058..1884035)
Genome browser
AA seq
325 aa
AA seq
DB search
MIGHQDAESAFVEAWAAGRLHHAWLLAGPQGMGKGAFAERVARFLVTHGSGGDGVPVSLN
DPGDAAAARLVDAGNHPEILSLTRQPKDKGKELARNITIDQVRGIIRRLHLSLSLGEWRV
IIVDAVDDLETDGANALLKTLEEPPAKTLFLLISHSPGRLLPTIRSRCRTLRFQPVAHDV
MTSWLHELRPMLEMAEVRAIVAASGGVPGKAIALIDSDVAAMEKKLLAIAANGDPGNRLR
EALARDVSGTSNRARLELVIDIVPGLLARLARERPVAEIAPVLAQWDRIQRTVRDAIRGS
YDGAMVGFEIGNCLAELAPKVAAAR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgatcggccatcaggacgccgaaagcgccttcgtcgaggcatgggccgctgggcggctt
caccatgcatggctgctcgcggggccgcaggggatggggaagggtgcctttgccgagcgg
gtggcgcggttcctcgtcactcacggaagcggcggcgatggcgtgccggtatcgctcaac
gaccccggcgatgccgctgcagcgcgccttgtcgacgccggcaaccatccggagattctt
tcgctgacgcgtcaaccgaaggacaagggcaaggagctcgcgcgcaatatcacgatcgac
caggtacgtggtatcatccgccgtctgcacctgtcgctgtcgctcggtgagtggcgggtg
atcatcgtcgatgcggtcgacgaccttgagaccgatggcgcgaatgccttgctcaagacg
ctcgaggagccgccagccaaaacgctgttcctgctgatcagtcactcacccgggcgcttg
ctgccgacgatccgttcgcggtgcagaacgcttcgttttcaaccggttgcacatgacgtc
atgacatcgtggctgcacgaattgcgcccgatgctcgaaatggcggaggtgcgtgcgatc
gttgccgcatcgggcggggtgcccggaaaggccatcgccttgatcgacagcgatgttgca
gcgatggagaaaaagctgctggcgatcgcggcgaacggcgaccccggtaaccgcctgcgc
gaagcgctggcgcgcgacgtttctggcaccagcaaccgcgcccggctcgaactggtgatc
gacatcgttcccgggctgctcgcgcggctggcgcgcgagcgcccggtagcggagatcgcg
ccggtgctggcgcaatgggaccgcatccagcggacggtgcgcgatgccatccgcggttcc
tacgacggcgcaatggtcgggttcgagatcggcaattgccttgccgaactcgcgccgaaa
gtcgcggcggcgcgataa
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