Sphingopyxis macrogoltabida EY-1: AN936_10280
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Entry
AN936_10280 CDS
T04104
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
smag
Sphingopyxis macrogoltabida EY-1
Pathway
smag03030
DNA replication
smag03430
Mismatch repair
smag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AN936_10280
03430 Mismatch repair
AN936_10280
03440 Homologous recombination
AN936_10280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smag03032
]
AN936_10280
03400 DNA repair and recombination proteins [BR:
smag03400
]
AN936_10280
Enzymes [BR:
smag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AN936_10280
DNA replication proteins [BR:
smag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AN936_10280
DNA repair and recombination proteins [BR:
smag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AN936_10280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
RuvB_N
AAA_5
AAA_22
AAA_30
AAA_16
AAA_14
AAA_19
PIF1
AAA_24
AAA_18
AAA_2
Glyco_tranf_2_5
DUF815
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
ALH80742
LinkDB
All DBs
Position
complement(2150389..2152113)
Genome browser
AA seq
574 aa
AA seq
DB search
MDDSADDDTPMLGMDLPEVKPQASSGPYRVLARKYRPQTFAELIGQDAMVKTLGNAIARD
RLAHAFLMTGVRGVGKTSTARLIAKALNCIGPDGQGGPTIDPCGVCEPCRAITEGRHIDV
IEMDAASNTGVDDVREIIEAVRYAAVSARYKIYIIDEVHMLSRNAFNALLKTLEEPPPHV
KFLFATTEVNKVPVTVLSRCQRFDLRRITPDMLFAHFSAILQKEGVEAEAPAIWLIANAA
EGSVRDGLSILDQAIAHADLESEEGGGGKIGADQVRAMLGLSDRTAITQLMATILGGDSG
GAIDFARAQYALGIEPVAMVRGLMDLTHAITLAKVSRHDDPALAAADRERIGDWAQKLGF
APLNRLWQLLLKGHDEVLRANNPLEHLEMLLLRVIYAASMPDPGELAKLLESGNLPTMPL
APPTPASVQDGPSDSAEIPIDAAAGTEPPATALTVAQIHQLLETTGNHRLAVQVYDYLRI
IELDPGNIVFAAVPALGGSFARDLGDALLTQTGSRWHVRPGEGEARPSLGEIRAARVADN
GERIRELPVVKAALAAFPDAKLVEDDDNRHKSQS
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggatgattccgccgacgacgataccccgatgctgggaatggacctgcccgaggtgaag
ccgcaggcatcgagcggcccttaccgcgtcctcgcccgcaaatatcgcccgcaaactttc
gccgagctgatcgggcaggatgcgatggtgaagacgctgggcaacgcgatcgcgcgcgac
cggctggcgcatgcgtttctgatgaccggggtgcgcggggtcggcaagacgtcgaccgcg
cgcttgatcgccaaggcgctcaattgcatcggtcccgacgggcagggcgggccgacgatc
gacccgtgcggggtctgcgagccgtgccgcgcgatcaccgaaggccgccatatcgacgtg
atcgagatggacgccgcgtcgaacaccggcgtcgatgatgtgcgcgagattatcgaggcg
gtgcgctatgccgctgtgtcggcgcgctacaagatctatatcatcgacgaagtgcacatg
ttgtcgcgtaacgccttcaacgcgctgctgaaaactctcgaagagccgccgccgcacgtc
aaattcctgttcgcgaccaccgaggtgaacaaggtgccggtgacggtgctatcgcgctgc
cagcggttcgatctccgccgcatcacccccgacatgctgttcgcgcatttcagcgcgatt
ttgcagaaagagggcgtcgaggccgaggcgccggcaatctggctgatcgccaacgccgcc
gaaggctcggtgcgcgacgggctgtcgatcctcgatcaggcgatcgcgcacgccgacctg
gaatcggaagaagggggcggcggcaagatcggcgccgaccaggtgcgcgcgatgctcggc
ctgtcggaccgcaccgcgatcacgcagttgatggcgacgatcctcggcggcgacagcggc
ggcgcgatcgactttgcccgcgcgcaatatgcgctgggcatcgaacccgtggcgatggtg
cgcgggctgatggacctgacgcatgcgatcacgctcgccaaggtgtcgcgccacgacgac
cccgcgctcgccgccgccgatcgcgagcgcatcggcgactgggcgcaaaagctcggattc
gcaccgctcaaccgcctctggcagctcctcctcaaggggcatgacgaggtgctgcgcgcg
aacaatccgctcgaacatctcgaaatgctgctgctccgagtgatctatgcggcgtcgatg
cccgatccgggcgagctggcgaagctcctcgaatcgggaaacctgccgacgatgccgctg
gcgccgccgaccccggcatcggtgcaggacgggccgtccgacagcgccgagatccctatc
gatgcggcggcaggtaccgagccgccggcaacggcgctgacagtggcgcaaatccatcaa
ctgctcgaaacgacaggaaatcacagacttgcagtgcaagtttatgattatttgcgaatt
atcgagctggaccccggcaatatcgtttttgccgccgtccccgcgctcggcggctcgttc
gcccgcgacctcggcgatgctctgctgacccagacgggcagccgctggcacgtccgcccc
ggcgagggcgaggcccggccgagccttggcgaaatccgcgcggcgcgcgtggccgacaat
ggcgaacggattcgcgaactgccggtcgtcaaggccgccctggccgcttttcccgatgcg
aagcttgtcgaagacgacgacaatcgccataagtcccagtcatga
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