Sphingopyxis macrogoltabida EY-1: AN936_10320
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Entry
AN936_10320 CDS
T04104
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
smag
Sphingopyxis macrogoltabida EY-1
Pathway
smag00260
Glycine, serine and threonine metabolism
smag00460
Cyanoamino acid metabolism
smag00630
Glyoxylate and dicarboxylate metabolism
smag00670
One carbon pool by folate
smag00680
Methane metabolism
smag01100
Metabolic pathways
smag01110
Biosynthesis of secondary metabolites
smag01120
Microbial metabolism in diverse environments
smag01200
Carbon metabolism
smag01230
Biosynthesis of amino acids
smag01240
Biosynthesis of cofactors
smag04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
smag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AN936_10320 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AN936_10320 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AN936_10320 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AN936_10320 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AN936_10320 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AN936_10320 (glyA)
Enzymes [BR:
smag01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AN936_10320 (glyA)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ALH80750
UniProt:
A0A0N9UM20
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Position
2156938..2158245
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AA seq
435 aa
AA seq
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MTTNTLDKPIKSAGYFTDGVGATDPAVAAAMKHELEREQHQIELIASENIVSKAVLEAQG
SVFTNKYAEGYPGRRYYQGCAPSDEVEQLAIDRAKQLFDCGYVNVQPHSGAQANGAVMLA
LTKPGATILGMSLDAGGHLTHGAPPAMSGKWFNAVQYGVRPDDHLVDFDQVEALAKEHRP
SLIIAGGSAYPRTLDFARFRQIADDVGALLMVDMAHFAGLVAGGAHPSPLPHAHVVTTTT
HKTLRGPRGGMILTNDEAIAKRINSAVFPGLQGGPLMHVIAAKAVAFGEALRPEFKDYAH
ATVANAQALAGRLKARGADVVAGGTDTHLALIDLRPLGVTGRDADEALERSAITCNKNGI
PFDPLPPIKTSGIRVGSPAGTTRGFGVAEFEEIGDMVADVLEALRDKGEHGDADVEADVR
GRVRALCERFPIYQG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaacacgctcgacaagcccatcaaatcggccggctatttcaccgatggcgtc
ggcgcgaccgatcccgccgtcgcggcagcgatgaagcatgaactcgaacgcgaacagcat
cagatcgaactgatcgcgtcggagaacatcgtctcgaaggcggtgctcgaggcgcagggc
agcgtcttcaccaacaaatatgccgagggttatcccggccgccgctactatcagggctgc
gccccctcggacgaggtcgaacagctcgcgatcgaccgcgccaagcagcttttcgactgc
ggctatgtcaacgtccagccgcactcgggcgcgcaagccaacggcgcggtgatgctggcg
ctgaccaagcccggcgcgacgatcctcggcatgagcctcgacgccggcggccacctgacc
cacggcgccccgcccgccatgtcgggcaaatggttcaacgcggttcagtacggcgtccgc
cccgacgaccatcttgtcgatttcgaccaggtcgaggcgctggcgaaggaacatcgtccc
tcactgatcatcgccggcggttcggcctatccgcgcacgctcgacttcgcgcgcttccgc
cagatcgccgacgatgtcggcgcgctgctgatggtcgacatggcgcatttcgccggcctc
gtcgccggcggcgcgcacccctcgccgctcccgcacgcgcatgtcgtcacgacgacgacg
cacaagacgctgcgcggtccgcgcggcggcatgatcctgaccaacgacgaagcgatcgcc
aagcggatcaactcggcggtcttcccgggcctgcagggcggcccattgatgcacgtcatc
gccgccaaggcagtggcattcggcgaagcgcttcgtcccgaattcaaggattacgcgcat
gcgaccgtcgccaatgcgcaggcgctcgccggccggctcaaggcacgcggcgctgacgtg
gtcgcgggcggcaccgacacgcacctcgcgctgatcgacctccgcccgctcggcgtcacc
ggccgcgatgctgacgaggcgctcgaacgcagcgcgatcacctgcaacaagaatggcatc
cccttcgatccgctgccgccgatcaagaccagcggcatccgcgtcggctcgcccgcgggc
acgacgcgcggcttcggcgtcgccgagttcgaggaaatcggcgatatggtcgccgacgtg
ctcgaagcgctgcgcgacaagggcgagcatggcgatgccgatgtcgaggccgatgtgcgg
gggcgcgtccgcgcgctgtgcgagcgtttccccatctatcagggataa
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