Sphingopyxis macrogoltabida EY-1: AN936_10720
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Entry
AN936_10720 CDS
T04104
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
smag
Sphingopyxis macrogoltabida EY-1
Pathway
smag04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
AN936_10720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smag03019
]
AN936_10720
03009 Ribosome biogenesis [BR:
smag03009
]
AN936_10720
04131 Membrane trafficking [BR:
smag04131
]
AN936_10720
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smag04147
]
AN936_10720
Messenger RNA biogenesis [BR:
smag03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
AN936_10720
Ribosome biogenesis [BR:
smag03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
AN936_10720
Membrane trafficking [BR:
smag04131
]
SNARE
SNARE associated proteins
Others
AN936_10720
Autophagy
Aggrephagy
Other aggrephagy associated proteins
AN936_10720
Exosome [BR:
smag04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AN936_10720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
AAA_5
AAA_33
CDC48_2
AAA_14
AAA_2
TIP49
AAA_lid_PRS2_C
AAA_28
nSTAND3
AAA_18
Mg_chelatase
IstB_IS21
NPHP3_N
RNA_helicase
Sigma54_activat
AAA_7
AAA_17
DUF815
Vps4_C
AAA_30
AAA_24
AAA_3
ABC_tran
AAA_11
TsaE
AAA_19
AAA_25
Zeta_toxin
nSTAND_NTPase5
NB-ARC
Parvo_NS1
Viral_helicase1
AstA_C
Motif
Other DBs
NCBI-ProteinID:
ALH80826
LinkDB
All DBs
Position
complement(2252324..2254648)
Genome browser
AA seq
774 aa
AA seq
DB search
MADAPVKEKQVKLQVANARAEESGGGIARISRAAMAQLGVTEGDIIGIHGKRETASRVMA
PYAEDEGLEVVRLDGLQRANAGAGAGDMVTLSRVETRPATRVVFAPAQENLRLQGSANAL
KRSFFGRPLVAGDTVATAGQQRVSAGDMPPQLRQMLNAPAYALAEVRLLVVSASPKGVVF
IDESTEVELLPEFQEPQDSRRTDVTYDDLGGLGETIDQLREMVELPLRYPELFRRLGVDP
PRGVLLHGPPGTGKTRLARAVANESEAQFFLINGPEIMGSAYGESEKRLRDIFEQAAKSA
PSILFIDEIDSIAPKRGQVQGEAEKRLVAQLLTLMDGLEPRTNLVVIAATNRPDAIDEAL
RRPGRFDREIVIGVPDEKGRREILGIHTRGMPLGENVDLDELARTTFGFVGADMAALTRE
AAIEAVRRIMPKLNLEEGTIPPEVLDELRVTREDFNNALKRVQPSAMREVMVQAPKTRWS
DIGGLDAARDKLIEGIELPLKNPEAFRRLGIRPAKGFLLYGPPGTGKTLLAKAAARESDA
NFISIKSSDLLSKWYGESEQQIARLFARARAVAPTIIFIDELDSLVPARGGGTSGEPQVT
ERVVNTILAEMDGIEEMQSVVVIGATNRPNLIDPALLRPGRLDELIYVSVPNAEGRQRIL
EIQTGKMPLADDVDLAALAERTDRFTGADLEDLTRRAGLAALKRSMDSDTVTMADFEEAL
KDTRASVTEAMEKDYEKIQGEIKQAAMSVNPIGFFAPGMLKPVRERKHEEVDKE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
ttggcggatgcaccggtaaaagaaaagcaagtcaagctgcaggtcgccaatgcgcgcgcc
gaagaaagcggcggcgggatcgcgcggatttcgcgtgcggcgatggcgcagctcggcgtg
accgagggcgacatcatcggaatccacggcaagcgcgagaccgcctcgcgcgtgatggcg
ccctatgccgaggacgagggactcgaagtcgtccgcctcgacggcttgcaacgcgccaat
gccggtgccggtgccggcgacatggtgacgctgagccgggtcgagacgcgccccgcgacg
cgcgtggtgttcgcgccggcgcaggagaatctccgccttcagggatcggcgaacgcgctg
aagcgcagcttcttcgggcggccgctggtcgcgggggatactgtcgcgaccgcggggcag
cagcgggtgtcggccggcgacatgccgccgcaactccgtcagatgctcaacgccccggcc
tatgctctcgccgaggtacgcctgctcgtcgtgtcggcgagccccaagggcgtcgtcttc
atcgacgagagtaccgaggtcgagctgcttcccgaatttcaggagccgcaggattcgcgc
cgcaccgacgtcacctacgatgatctcggcgggctcggcgagacgatcgaccagcttcgc
gagatggtcgaattgccgctccgctaccccgaactgttccgccgtctcggcgtcgatccg
ccgcgcggggtgctgctgcacggcccgccgggaacgggaaagacgcggctggcgcgcgcg
gtcgcgaacgaaagcgaggcgcaattcttcctgatcaacgggcccgagatcatggggtcc
gcctatggcgaatccgaaaagcgcctgcgcgatatcttcgaacaggcggccaagtcggcg
ccatcgatcctgttcatcgacgagatcgattcgatcgcgccgaagcgcgggcaggtgcag
ggcgaggccgagaagcgcctcgtcgcgcaattgctgacgctgatggacgggctcgaaccg
cggaccaacctcgtcgtcatcgctgcgaccaatcgtcccgacgcgatcgacgaggcgctg
cggcggcccggccgcttcgaccgcgagatcgtgatcggcgtgcccgatgaaaagggacgg
cgcgagatattgggcatccacacccgcggcatgccgctgggcgagaatgtcgatctcgac
gaacttgcccggacgaccttcggtttcgtcggcgccgacatggcggcgctgacgcgcgag
gcggcgatcgaggcggtgcggcggatcatgccgaaactgaaccttgaggaagggacgatc
ccgcccgaggtgctcgacgaactgcgcgtgacccgcgaggacttcaacaatgcgctgaag
cgcgtgcagccgtcggcgatgcgcgaggtgatggtgcaggcgccgaagacgcggtggagc
gacatcggcgggctcgacgccgcgcgcgacaagctgatcgaaggcatcgaactgccgctc
aaaaaccccgaggcgttccgccgcctcggcatccgtccggccaagggcttcctgctctat
ggcccgccggggaccggcaagaccctgctcgcgaaggcggcggcgcgcgaatccgatgcc
aatttcatctcgatcaaatcgtcggacctgctgtcgaaatggtatggcgagagcgagcag
cagattgcgcggctgttcgcccgcgcccgcgcggtggcgccgacgatcatcttcatcgac
gaactcgacagcctcgtccccgcgcggggcggcgggacgtcgggcgagccgcaggtgacc
gagcgcgtcgtcaacacgatcctcgccgagatggacgggatcgaggagatgcagtcggtc
gtcgtcatcggcgcgaccaaccgcccgaaccttatcgatccggcgctgctgcggccgggt
cggctcgacgaactgatctatgtgtcggtgccgaatgccgaggggcgccagcgcatcctc
gaaatccagaccggcaagatgccgctggcggacgatgtcgatctggcggcgctcgccgaa
cggacggatcgcttcaccggcgccgatctggaagacctgacacgccgcgccgggctcgcg
gcgctcaagcggtcgatggacagtgacacggtgacgatggccgacttcgaagaagctctg
aaggacacccgcgcctcggtgaccgaggcgatggagaaagattatgaaaagatccagggc
gagatcaagcaggccgcgatgagcgtcaatccgatcggcttcttcgcgccaggcatgctc
aagcccgtccgtgagcggaagcatgaggaagtcgacaaggagtaa
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