Sphingopyxis macrogoltabida EY-1: AN936_13515
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Entry
AN936_13515 CDS
T04104
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
smag
Sphingopyxis macrogoltabida EY-1
Pathway
smag03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AN936_13515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smag03400
]
AN936_13515
DNA repair and recombination proteins [BR:
smag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AN936_13515
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AN936_13515
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
DUF87
AAA_16
Microtub_bd
DUF2963
AAA_22
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
ALH81342
UniProt:
A0A0N9U7T7
LinkDB
All DBs
Position
2864630..2866852
Genome browser
AA seq
740 aa
AA seq
DB search
MWTRTIDTILALMAIQIRTSLDEIDTAADYVPHRPARPDKVEGGKRFELVSDYEPAGDQP
TAIRELVSTALDGERDQVLLGVTGSGKTFTMAKVIEELQRPALILAPNKILAAQLYGEFK
SFFPNNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERDDVII
VASVSCLYGIGSVETYSAMIFDLKKGQVADNREIIRKLVALQYKRNDQAFARGNFRVRGD
SLEIFPSHYEDMAWRVSFFGDEIEEITEFDPLTGKKIASLNYVRIYANSHYVTPGPTLKQ
ATEAIRHELAERLKELEAEGRLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLP
GEPPPTLFEYLPDNALLFVDESHQTIPQIGAMSKGDHRRKITLAEYGFRLPSCIDNRPLR
FAEWDVMRPQTVSVSATPGTWEMDRTQGVFAEQVIRPTGLIDPPVIIRPVEEQVDDLIME
AKATAANGYRTLVTTLTKRMAEDLTEFLHEAGLKVRYMHSDVETLERIEIIRDLRLGVFD
VLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLVQTIGRAARNVDGRVILYADRIT
GSMERAMRETDRRREKQEAYNAEHGITPTTIKRNIGDIIAHVASKDQVTIDIGEDKPAHM
VGHNLRAYIQDLEKKMRDAAADLEFEEAGRLRDEIRRLEADELGLPADEQVAPRVGRSNE
GKPGTRKGRFGKQSKTKWGR
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
ttgtggacccgcaccatcgataccatattggcgttgatggcaattcagattcgtacatcg
ctcgatgaaatcgatacggccgcggactatgtcccgcaccgccctgcccgccccgacaag
gtcgaaggcggcaaaagattcgaactggtcagcgactatgagccggcgggcgaccagccg
accgcgatccgcgaactggtgtcgaccgccctcgacggtgagcgcgatcaggtgctgctc
ggcgtcaccggctcgggcaagaccttcaccatggccaaggtcatcgaggaattgcagcgc
ccggcgctgatcctcgccccgaacaagatcctcgcggcgcagctctatggcgagttcaag
agcttctttccgaacaatgcggtcgaatatttcgtcagctattacgactattaccagccc
gaggcctatgtgccgcgctcggacacctatatcgagaaggaaagctcggtaaacgaagcg
atcgaccggatgcgccattcggcgacgcgcgcgctgctcgaacgcgacgacgtgatcatc
gtcgcgtcggtgtcgtgcctctacggcatcgggtcggtcgagacttactcggcgatgatc
ttcgacctcaaaaagggtcaggtcgccgacaatcgcgagatcatccgcaagctcgtcgcg
ctccagtacaagcgcaacgatcaggcctttgcgcgcggcaatttccgcgtgcgcggcgac
agcctcgaaatcttcccctcgcactacgaggacatggcgtggcgcgtcagcttcttcggc
gacgagatcgaggagatcaccgaattcgatccgctgaccggcaagaagatcgccagcctc
aactatgtccgcatctatgcgaacagccactatgtcaccccggggccgacgctcaaacag
gcgaccgaggcgatccgccacgagcttgccgagcgcctcaaggaactcgaggccgagggc
cggctgctcgaggcacagcggctcgaacagcgcaccaatttcgacctcgaaatgatcgcc
gcgacgggcagctgcgcggggatcgagaattacagccgcttcctgaccggccgcctgccc
ggcgagccgccgccgactttgttcgaatatctccccgacaacgccctgctgttcgtcgac
gagagccaccagacgatcccgcagatcggcgcgatgtcgaagggcgatcaccgccgcaag
atcacgctggccgaatatggcttccgcctgccgtcgtgcatcgacaaccggccgctgcgt
tttgcagaatgggacgtcatgcggccgcagacggtcagcgtctcggcgacgcccggcacg
tgggagatggaccgcacgcagggcgtcttcgccgaacaggtgatccgcccgacggggctc
atcgacccgccggtgatcatccgtccggtcgaggaacaggtcgacgacctgatcatggag
gccaaggcgaccgcggcaaacggctatcgcaccctcgtcacgacgctgaccaagcgcatg
gccgaagaccttaccgaattcctccacgaggcggggctcaaggtccgttacatgcactcg
gacgtcgagacgctggagcgtatcgagatcatccgcgacctccgcctcggggtgttcgac
gtgctcgtcgggatcaacctgctgcgcgaagggctcgatatccccgagtgcggactcgtc
gcgatcctcgatgccgacaaggaaggctttctgcgcagcgagacgtcgctggtgcagacg
atcggccgcgccgcgcgcaatgtcgacgggcgcgtcatcctctatgccgaccgcatcacc
ggcagcatggaacgcgcgatgcgcgagaccgaccgccgccgcgaaaagcaggaggcctat
aacgccgaacacggcatcaccccgacgacgatcaagcgcaatatcggcgacatcatcgcg
catgtcgcgtcgaaggatcaggtgacgatcgacatcggcgaggacaagccggcgcatatg
gtcggccacaacctccgcgcctatatccaggacctcgaaaagaagatgcgcgacgccgcc
gccgacctggagttcgaggaagccgggcgcctgcgtgacgagatccgccgattggaagcc
gacgagctcggcctccccgccgatgaacaggtcgccccgcgcgtcggccgctcgaacgaa
ggcaagccggggacgcgcaaggggcggttcggcaagcagagcaagaccaagtgggggcga
tag
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integrated database retrieval system