KEGG   Sphingopyxis macrogoltabida EY-1: AN936_13515
Entry
AN936_13515       CDS       T04104                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
smag  Sphingopyxis macrogoltabida EY-1
Pathway
smag03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smag00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AN936_13515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smag03400]
    AN936_13515
DNA repair and recombination proteins [BR:smag03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AN936_13515
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AN936_13515
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H Kinesin DUF87 AAA_16 Microtub_bd DUF2963 AAA_22 SWI2_SNF2
Other DBs
NCBI-ProteinID: ALH81342
UniProt: A0A0N9U7T7
LinkDB
Position
2864630..2866852
AA seq 740 aa
MWTRTIDTILALMAIQIRTSLDEIDTAADYVPHRPARPDKVEGGKRFELVSDYEPAGDQP
TAIRELVSTALDGERDQVLLGVTGSGKTFTMAKVIEELQRPALILAPNKILAAQLYGEFK
SFFPNNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERDDVII
VASVSCLYGIGSVETYSAMIFDLKKGQVADNREIIRKLVALQYKRNDQAFARGNFRVRGD
SLEIFPSHYEDMAWRVSFFGDEIEEITEFDPLTGKKIASLNYVRIYANSHYVTPGPTLKQ
ATEAIRHELAERLKELEAEGRLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLP
GEPPPTLFEYLPDNALLFVDESHQTIPQIGAMSKGDHRRKITLAEYGFRLPSCIDNRPLR
FAEWDVMRPQTVSVSATPGTWEMDRTQGVFAEQVIRPTGLIDPPVIIRPVEEQVDDLIME
AKATAANGYRTLVTTLTKRMAEDLTEFLHEAGLKVRYMHSDVETLERIEIIRDLRLGVFD
VLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLVQTIGRAARNVDGRVILYADRIT
GSMERAMRETDRRREKQEAYNAEHGITPTTIKRNIGDIIAHVASKDQVTIDIGEDKPAHM
VGHNLRAYIQDLEKKMRDAAADLEFEEAGRLRDEIRRLEADELGLPADEQVAPRVGRSNE
GKPGTRKGRFGKQSKTKWGR
NT seq 2223 nt   +upstreamnt  +downstreamnt
ttgtggacccgcaccatcgataccatattggcgttgatggcaattcagattcgtacatcg
ctcgatgaaatcgatacggccgcggactatgtcccgcaccgccctgcccgccccgacaag
gtcgaaggcggcaaaagattcgaactggtcagcgactatgagccggcgggcgaccagccg
accgcgatccgcgaactggtgtcgaccgccctcgacggtgagcgcgatcaggtgctgctc
ggcgtcaccggctcgggcaagaccttcaccatggccaaggtcatcgaggaattgcagcgc
ccggcgctgatcctcgccccgaacaagatcctcgcggcgcagctctatggcgagttcaag
agcttctttccgaacaatgcggtcgaatatttcgtcagctattacgactattaccagccc
gaggcctatgtgccgcgctcggacacctatatcgagaaggaaagctcggtaaacgaagcg
atcgaccggatgcgccattcggcgacgcgcgcgctgctcgaacgcgacgacgtgatcatc
gtcgcgtcggtgtcgtgcctctacggcatcgggtcggtcgagacttactcggcgatgatc
ttcgacctcaaaaagggtcaggtcgccgacaatcgcgagatcatccgcaagctcgtcgcg
ctccagtacaagcgcaacgatcaggcctttgcgcgcggcaatttccgcgtgcgcggcgac
agcctcgaaatcttcccctcgcactacgaggacatggcgtggcgcgtcagcttcttcggc
gacgagatcgaggagatcaccgaattcgatccgctgaccggcaagaagatcgccagcctc
aactatgtccgcatctatgcgaacagccactatgtcaccccggggccgacgctcaaacag
gcgaccgaggcgatccgccacgagcttgccgagcgcctcaaggaactcgaggccgagggc
cggctgctcgaggcacagcggctcgaacagcgcaccaatttcgacctcgaaatgatcgcc
gcgacgggcagctgcgcggggatcgagaattacagccgcttcctgaccggccgcctgccc
ggcgagccgccgccgactttgttcgaatatctccccgacaacgccctgctgttcgtcgac
gagagccaccagacgatcccgcagatcggcgcgatgtcgaagggcgatcaccgccgcaag
atcacgctggccgaatatggcttccgcctgccgtcgtgcatcgacaaccggccgctgcgt
tttgcagaatgggacgtcatgcggccgcagacggtcagcgtctcggcgacgcccggcacg
tgggagatggaccgcacgcagggcgtcttcgccgaacaggtgatccgcccgacggggctc
atcgacccgccggtgatcatccgtccggtcgaggaacaggtcgacgacctgatcatggag
gccaaggcgaccgcggcaaacggctatcgcaccctcgtcacgacgctgaccaagcgcatg
gccgaagaccttaccgaattcctccacgaggcggggctcaaggtccgttacatgcactcg
gacgtcgagacgctggagcgtatcgagatcatccgcgacctccgcctcggggtgttcgac
gtgctcgtcgggatcaacctgctgcgcgaagggctcgatatccccgagtgcggactcgtc
gcgatcctcgatgccgacaaggaaggctttctgcgcagcgagacgtcgctggtgcagacg
atcggccgcgccgcgcgcaatgtcgacgggcgcgtcatcctctatgccgaccgcatcacc
ggcagcatggaacgcgcgatgcgcgagaccgaccgccgccgcgaaaagcaggaggcctat
aacgccgaacacggcatcaccccgacgacgatcaagcgcaatatcggcgacatcatcgcg
catgtcgcgtcgaaggatcaggtgacgatcgacatcggcgaggacaagccggcgcatatg
gtcggccacaacctccgcgcctatatccaggacctcgaaaagaagatgcgcgacgccgcc
gccgacctggagttcgaggaagccgggcgcctgcgtgacgagatccgccgattggaagcc
gacgagctcggcctccccgccgatgaacaggtcgccccgcgcgtcggccgctcgaacgaa
ggcaagccggggacgcgcaaggggcggttcggcaagcagagcaagaccaagtgggggcga
tag

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