Sphingopyxis macrogoltabida EY-1: AN936_15965
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Entry
AN936_15965 CDS
T04104
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
smag
Sphingopyxis macrogoltabida EY-1
Brite
KEGG Orthology (KO) [BR:
smag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smag03400
]
AN936_15965
DNA repair and recombination proteins [BR:
smag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AN936_15965
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_16
AAA_22
AAA_30
AAA_5
RecA
Lon_C
AAA
SLFN-g3_helicase
AAA_24
nSTAND3
NTPase_1
ATPase_2
CobU
AAA_14
Ribosomal_L37e
Zn_ribbon_6
Glyco_hydro2_C5
CbiA
ABC_tran
AAA_29
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
ALH81796
UniProt:
A0A0N9VBQ8
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Position
complement(3395298..3396716)
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AA seq
472 aa
AA seq
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MTVVEKGWRSLFVLGKRNVMAKAKRQYVCQNCGSVSYRWQGQCADCGEWNTLVEEAGETA
FSAKHDLSRGGRTLALETLDAQSVMPERMLCGIAEFDRALGGGFVAGSATLIGGDPGIGK
STLLLQAAGRLAKAGKSVVYISGEEAAAQVRLRAQRLGLGDAPVALASATSVRDILATLD
SRTADFVVIDSIQTMHSDLIDSAPGTVSQVRASAQELIRYAKDGGAAIVLVGHVTKDGTI
AGPRVLEHMVDTVLAFEGERSHQYRILRAVKNRFGGTDEIGVFAMGEEGLGEVANPSSLF
LTDRSRDVPGSVVFPALEGTRPVLVEVQALTVRLASGATPRRAVVGWDSGRLAMVLAVLE
ARCGLQMGAAEVYLNIAGGYRLTDPAADLAVAAALISAFSERPVPADAIVFGELSLSGEV
RQVAHDGLRLREAVKLGFARGWGPKGMRGVGGISVTGFGRLGELVDLMLGRD
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtggtggaaaaggggtggcgttcgttgtttgttctaggtaagcgcaacgtcatg
gccaaagcgaagcgtcaatatgtctgccagaattgcggatcggtttcgtaccggtggcag
ggtcagtgcgccgactgcggcgagtggaacacgctggtcgaagaggccggcgaaacggcc
ttttcggcgaagcatgacctgagccgcggcgggcggacgctcgcgctcgaaacgctcgat
gcacaaagcgtgatgcccgaacggatgctgtgcggaatcgccgaattcgaccgcgcgctg
ggcggcggcttcgtcgcgggttcggcgacgctgatcggcggcgatcctgggatcggcaag
tcgacgctgctcttgcaggcggcaggacggctcgcgaaggcgggcaagtcggtcgtctat
atcagcggcgaggaagcggcggcgcaggtgcggctgcgcgcccagcggctggggctcggc
gatgcgccggtcgcgctggcgagcgcgacctcggtgcgcgacatccttgcgacgctcgac
agccgcaccgccgatttcgtcgtcatcgattcgatccagacgatgcacagcgacctgatc
gacagcgcaccggggacggtgagccaggtccgcgcgagcgcgcaggaactgatccgctat
gccaaggacggcggcgcggcgatcgtgctcgtcggccatgttaccaaggacgggacgatc
gccggcccgcgcgtgctcgaacatatggtcgacaccgtgctggcgttcgagggcgagcgc
agccaccagtatcgcatcctgcgcgcggtcaagaaccgcttcggcggcaccgacgagatc
ggcgtcttcgcgatgggcgaggaagggttgggcgaagtcgccaacccgtcgagcctgttc
ctgaccgaccgcagccgcgacgtgccggggtcggtggtcttcccggcgctcgaagggacg
cgcccggtgctcgtcgaggtgcaggcgctgacggtgcggctggcgagcggcgcgacgccg
cgccgcgccgtcgttggctgggacagcggacgcctcgcgatggtgctcgcggtgctggag
gcgcgctgcgggctgcagatgggggccgccgaagtctatctcaacatcgcgggcggctac
cggctcaccgatccggccgccgaccttgcggtcgccgccgcgctcatctcggcgttcagc
gagcggccggtgcccgccgacgcgatcgtctttggcgagctgtcgctgtcgggcgaggtg
cggcaggtcgcgcacgacgggctgcggctccgcgaggccgtaaagctcggctttgcgcgc
ggctggggcccgaaagggatgagaggcgtcggcggaatttcggtcaccggtttcggccgc
ctcggcgaactcgttgacctgatgctcgggcgcgactag
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